Pairwise Alignments

Query, 377 a.a., flagellin C from Vibrio cholerae E7946 ATCC 55056

Subject, 420 a.a., flagellin FliC from Escherichia coli ECRC62

 Score =  204 bits (518), Expect = 5e-57
 Identities = 144/425 (33%), Positives = 221/425 (52%), Gaps = 56/425 (13%)

Query: 1   MAVNVNTNVSAMTAQRYLTSATNAQQSSMERLSSGYKINSAKDDAAGLQISNRLNVQSRG 60
           MA  +NTN  ++  Q  +    +A  SS+ERLSSG +INSAKDDAAG  I+NR     +G
Sbjct: 1   MAQVINTNSLSLITQNNINKNQSALSSSIERLSSGLRINSAKDDAAGQAIANRFTSNIKG 60

Query: 61  LGVAVRNANDGISMAQTAEGAMKETTNILQRMRDLSLQSANGSNSKADRVAIQEEITALN 120
           L  A RNANDGIS+AQT EGA+ E  N LQR+R+L++Q+  G+NS++D  +IQ+EI +  
Sbjct: 61  LTQAARNANDGISVAQTTEGALSEINNNLQRVRELTVQATTGTNSESDLSSIQDEIKSRL 120

Query: 121 DELNRVAETTSFGGNKLLNGTFATKSFQIGADNGEAVMLNIKDMRSDNALMGGKTYQAAN 180
           +E++RV+  T F G  +L       + Q+GA++G+ + +++K  + D++ +   ++ A N
Sbjct: 121 EEIDRVSSQTQFNGVNVL-AKDGKMNIQVGANDGQTITIDLK--KIDSSTLNLSSFDATN 177

Query: 181 -------GKDKNWGVEAGKTDLTITLKDKREGDV-TISINAKEGDDIEELAT---YINGQ 229
                  G   N  V  G  D     KDK  G + T+ +  K+G       T   Y + +
Sbjct: 178 LGTSVKDGATINKQVAVGAGD----FKDKASGSLGTLKLVEKDGKYYVNDTTNSKYYDAE 233

Query: 230 TDMIKASVDEEGKLQLFTDNNRIDGAATFG-------GALAGELGIGAAQDVT------V 276
            D  K  ++     +  T         T G        AL     +   +D +      +
Sbjct: 234 VDTSKGEINFNSTNESGTPPTAATEVTTVGRDVKLDASALKANQSLVVYKDKSGNDAYII 293

Query: 277 DTLDVTT-----------------VGGA--------QESVAIVDAALKYVDSHRAELGAF 311
            T DVTT                 +G +         + +  +D A+  VD  R+ LGA 
Sbjct: 294 QTKDVTTNQSTFNAANISDAGVLSIGASTTAPSNLTADPLKALDDAIASVDKFRSSLGAV 353

Query: 312 QNRFNHAINNLDNINENVNASKSRIKDTDFAKETTALTKAQILSQASSSVLAQAKQAPNS 371
           QNR + AI NL+N   N++ ++SRI+D D+A E + ++KAQI+ QA +SVLA+A Q P  
Sbjct: 354 QNRLDSAIANLNNTTTNLSEAQSRIQDADYATEVSNMSKAQIIQQAGNSVLAKANQVPQQ 413

Query: 372 ALALL 376
            L+LL
Sbjct: 414 VLSLL 418