Pairwise Alignments

Query, 377 a.a., flagellin C from Vibrio cholerae E7946 ATCC 55056

Subject, 436 a.a., Flagellin from Escherichia fergusonii Becca

 Score =  203 bits (516), Expect = 8e-57
 Identities = 147/435 (33%), Positives = 228/435 (52%), Gaps = 60/435 (13%)

Query: 1   MAVNVNTNVSAMTAQRYLTSATNAQQSSMERLSSGYKINSAKDDAAGLQISNRLNVQSRG 60
           MA  +NTN  ++  Q  +    +A  +S+ERLSSG +INSAKDDAAG  I+NR     +G
Sbjct: 1   MAQVINTNSLSLITQNNINKNQSALSTSIERLSSGLRINSAKDDAAGQAIANRFTSNIKG 60

Query: 61  LGVAVRNANDGISMAQTAEGAMKETTNILQRMRDLSLQSANGSNSKADRVAIQEEITALN 120
           L  A RNANDGIS+AQT EGA+ E  N LQR+R+L++Q+  G+NS +D  +IQ+EI +  
Sbjct: 61  LTQAARNANDGISLAQTTEGALSEINNNLQRVRELTVQATTGTNSDSDLSSIQDEIKSRL 120

Query: 121 DELNRVAETTSFGGNKLLNGTFATKSFQIGADNGEAVMLNIKDMRSDNALMGGKTY--QA 178
           DE++RV+  T F G  +L    + K  Q+GA++G+ + ++++ + S    + G +   Q+
Sbjct: 121 DEIDRVSGQTQFNGVNVLAKDGSMK-IQVGANDGQTISIDLQKIDSSTLGLNGFSVSGQS 179

Query: 179 ANGKD----------------------KNWGVEAGKT----DLTITLKDKREGDVTISIN 212
            N  D                      K+     GKT     LT+      +G  T    
Sbjct: 180 LNVSDSITQITGAAGTKPVGVDFTAVAKDLTTATGKTVDVSSLTLHNTLDAKGAATSQFV 239

Query: 213 AKEGDDIEELA-TYINGQTDMIKASVD----EEGKLQLFTDNNR-IDGAATFGGALAGEL 266
            + G+D    +  + +G+  + KA V+    + G     T  ++ I  AA   G+ AG +
Sbjct: 240 VQSGNDFYSASINHTDGKVTLNKADVEYTDTDNGLTTAATQKDQLIKVAADSDGSAAGYV 299

Query: 267 GI-GAAQDVTVDT-LDVTTVGGAQES-----------------------VAIVDAALKYV 301
              G     TV T LD  T   A ++                       +A++D A+  V
Sbjct: 300 TFQGKNYATTVSTALDDNTAAKATDNKVVVELSTAKPTAQFSGASSADPLALLDKAIAQV 359

Query: 302 DSHRAELGAFQNRFNHAINNLDNINENVNASKSRIKDTDFAKETTALTKAQILSQASSSV 361
           D+ R+ LGA QNR + A+ NL+N   N++ ++SRI+D D+A E + ++KAQI+ QA +SV
Sbjct: 360 DTFRSSLGAVQNRLDSAVTNLNNTTTNLSEAQSRIQDADYATEVSNMSKAQIIQQAGNSV 419

Query: 362 LAQAKQAPNSALALL 376
           L++A Q P   L+LL
Sbjct: 420 LSKANQVPQQVLSLL 434