Pairwise Alignments

Query, 377 a.a., flagellin C from Vibrio cholerae E7946 ATCC 55056

Subject, 450 a.a., Flagellin B from Alteromonas macleodii MIT1002

 Score =  111 bits (277), Expect = 5e-29
 Identities = 71/188 (37%), Positives = 96/188 (51%), Gaps = 14/188 (7%)

Query: 19  TSATNAQQSSMERLSSGYKINSAKDDAAGLQISNRLNVQSRGLGVAVRNANDGISMAQTA 78
           T    A  + +ERLSSG +INSA DD+AGLQISNRL  + R      RN NDGIS AQ A
Sbjct: 15  TLQNTALSTRLERLSSGLRINSAADDSAGLQISNRLASEKRAYTQLNRNLNDGISYAQIA 74

Query: 79  EGAMKETTNILQRMRDLSLQSANGSNSKADRVAIQEEITALNDELNRVAETTSFGGNKLL 138
           EG ++E+  ILQRMR L++QS NG NS +DR A+ +E   L + LN +A  T       L
Sbjct: 75  EGGLQESAAILQRMRQLAIQSQNGINSVSDRAALDKEFQQLKNALNGIAYNTEAFNRLPL 134

Query: 139 NGTFATKSFQIGADNGEAVMLNIKDMRSDNALMGGKTYQAANGKDKNWGVEAGKTDLTIT 198
                        D+ + +  N+  +   +    G      +G      + AG T++ I 
Sbjct: 135 ------------VDDSDLLSANVPSI--SDTFTNGVNQSMTSGLRSIAYIPAGSTNIQIN 180

Query: 199 LKDKREGD 206
           L D    D
Sbjct: 181 LNDNGAND 188