Pairwise Alignments

Query, 377 a.a., flagellin C from Vibrio cholerae E7946 ATCC 55056

Subject, 266 a.a., Flagellin from Alteromonas macleodii MIT1002

 Score =  102 bits (253), Expect = 2e-26
 Identities = 58/157 (36%), Positives = 90/157 (57%), Gaps = 1/157 (0%)

Query: 8   NVSAMTAQRYLTSATNAQQSSMERLSSGYKINSAKDDAAGLQISNRLNVQSRGLGVAVRN 67
           NV A +    +      + +  E+L+SG K+NSA D+AA  QI +R   Q  G   A++N
Sbjct: 3   NVGADSVSAQIGQIQQKEDNLFEKLASGKKVNSALDEAAAQQIIDRFTTQVEGNRQAIKN 62

Query: 68  ANDGISMAQTAEGAMKETTNILQRMRDLSLQSANGSNSKADRVAIQEEITALNDELNRVA 127
             DGIS+AQ AEG +    + + R+R+LSLQS +G  + +DR AIQ EIT L   + +  
Sbjct: 63  LYDGISVAQIAEGGLSTINDDVNRIRELSLQSGSGILNDSDRRAIQSEITQLQKNIVQSI 122

Query: 128 ETTSFGGNKLLNGTFATKSFQIGADNGEAVMLNIKDM 164
           E T+F G  LL+    +  FQ G +  +++ +N +D+
Sbjct: 123 EQTNFAGKPLLSDA-GSLEFQAGVNANQSISVNTQDV 158



 Score = 62.4 bits (150), Expect = 1e-14
 Identities = 40/129 (31%), Positives = 65/129 (50%), Gaps = 12/129 (9%)

Query: 260 GALAGELGIGAAQDVTVDT------------LDVTTVGGAQESVAIVDAALKYVDSHRAE 307
           G+L  + G+ A Q ++V+T            +D+T+    ++++   D+AL+ +   R E
Sbjct: 137 GSLEFQAGVNANQSISVNTQDVAAQLNDVFAIDITSGTSVEDALNAADSALESIGGARGE 196

Query: 308 LGAFQNRFNHAINNLDNINENVNASKSRIKDTDFAKETTALTKAQILSQASSSVLAQAKQ 367
            GA  NR      +L   N N   +KSRI+  D+A+  +      I SQAS +V AQA Q
Sbjct: 197 FGASLNRLESTARSLVKGNVNAAEAKSRIESVDYAQAASERAINDIRSQASLTVQAQANQ 256

Query: 368 APNSALALL 376
             +  L+LL
Sbjct: 257 QQSQVLSLL 265