Pairwise Alignments

Query, 377 a.a., flagellin C from Vibrio cholerae E7946 ATCC 55056

Subject, 430 a.a., flagellin protein FlaD from Agrobacterium fabrum C58

 Score = 73.2 bits (178), Expect = 1e-17
 Identities = 96/432 (22%), Positives = 169/432 (39%), Gaps = 66/432 (15%)

Query: 4   NVNTNVSAMTAQRYLTSATNAQQSSMERLSSGYKINSAKDDAAGLQISNRLNVQSRGLGV 63
           ++ TN +AM A + L       +++  R+SSG+++ +A D+AA   I+  +   +  L  
Sbjct: 3   SILTNAAAMAALQTLRMIDKNLETTQARVSSGFRVETAADNAAYWSIATTMRSDNSALSA 62

Query: 64  AVRNANDGISMAQTAEGAMKETTNILQRMRDLSLQSANGSNSKADRVAIQEEITALNDEL 123
                  G +   TA  A++ T  ++++++   L +A G    ADR  IQ+EI  L ++L
Sbjct: 63  VQDALGLGAAKVDTAYDALESTIEVVKQIK-AKLVAAYGVG--ADRGKIQDEIKQLQEQL 119

Query: 124 NRVAETTSFGGNKLLNGTFATKSFQIGADN-GEAVMLNIKDMRSDNA-------LMGGKT 175
             ++E+ SF G   L  + +       A++  + V+ +     S N         +   T
Sbjct: 120 KSISESASFSGENWLQASISNSGTPPVAESITKKVVASFTRTGSGNVGVTTVDYTLDSST 179

Query: 176 --YQAANGK----DKN-------------WGVEAGKTDLTITLKDKREGDVTISINAKEG 216
             +  + GK    DKN                 AGKT     + +K       ++NA   
Sbjct: 180 VLFDLSGGKLGILDKNAVFVSKTETEVMQTSTTAGKTSQAGYVVEKLSDAQIGALNATTT 239

Query: 217 DDIEELATYINGQTDMIKASVDEEGKLQLFTDNNRIDGAAT-------------FGGALA 263
           D   +   Y NG  + ++ +   E      T  N   G  T             F    A
Sbjct: 240 DTNTDPNLYSNGTDNYLRLA---ENVWVKATATNPSSGGTTVSPAYRDTGSTDWFYDVSA 296

Query: 264 GELGIGAAQDVTVDTLDV-----------------TTVGGAQE---SVAIVDAALKYVDS 303
           G      +   +V TLD+                 TT  GA      ++ VD  L+ + S
Sbjct: 297 GTASANRSLGFSVSTLDLGNLDVVAAAMGGFAGGGTTYTGADAIDMMMSFVDKQLEAMTS 356

Query: 304 HRAELGAFQNRFNHAINNLDNINENVNASKSRIKDTDFAKETTALTKAQILSQASSSVLA 363
             + LG+ Q+R +   N + ++ + ++    R+ D D  +E+T L   Q   Q     L+
Sbjct: 357 TASSLGSLQSRISMQENFVSSLMDVIDKGVGRLVDADMNEESTRLKALQTQQQLGIQALS 416

Query: 364 QAKQAPNSALAL 375
            A     + L L
Sbjct: 417 IANANAENILQL 428