Pairwise Alignments

Query, 377 a.a., flagellin C from Vibrio cholerae E7946 ATCC 55056

Subject, 320 a.a., flaB from Agrobacterium fabrum C58

 Score = 70.5 bits (171), Expect = 6e-17
 Identities = 89/378 (23%), Positives = 145/378 (38%), Gaps = 68/378 (17%)

Query: 4   NVNTNVSAMTAQRYLTSATNAQQSSMERLSSGYKINSAKDDAAGLQISNRLNVQSRGLGV 63
           ++ TNV+AM+A + L S     +S+  R+SSG ++  A D+AA   I+  +   +  L  
Sbjct: 3   SIITNVAAMSALQTLRSIGQNMESTQARVSSGLRVGDASDNAAYWSIATTMRSDNMALSS 62

Query: 64  AVRNANDGISMAQTAEGAMKETTNILQRMRDLSLQSANGSNSKADRVAIQEEITALNDEL 123
                  G +   TA   M    +++   +++  +    +    DR  +QEEI  L  +L
Sbjct: 63  VSDALGLGAAKVDTASAGMSSAIDVV---KEIKAKLVTATEEGVDRTKVQEEIGQLQKQL 119

Query: 124 NRVAETTSFGGNKLLNGTFATKSFQIGADNGEAVMLNIKDMRSDNALMGGKTYQAANGKD 183
             +++  SF G   L G     +   G D              D +++ G  +  A+G  
Sbjct: 120 ASISQGASFYGENWLVGVSTLGAATPGTD-------------PDKSVVAG--FVRASG-- 162

Query: 184 KNWGVEAGKTDLTITLKDKREGDVTISINAKEGDDIEELATYINGQTDMIKASVDEEGKL 243
                  G   +T T   K   D T + N   G                   SVD  G  
Sbjct: 163 -------GAVSVTTT---KYALDNTATGNVLFG-------------------SVDGTGTP 193

Query: 244 QLFTDNNRIDGAATFGGALAGELGIGAAQDVTVDTLDVTTVGGAQ------ESVAIVDAA 297
                    D +   G    G     AAQ V   TLD+T    A       E++ +V+ +
Sbjct: 194 ---------DASGILG--TVGTFTTVAAQSVY--TLDITQYAAADRATNMAEALTLVENS 240

Query: 298 LKYVDSHRAELGAFQNRFNHAINNLDNINENVNASKSRIKDTDFAKETTALTKAQILSQA 357
           LK + S  A+LG+   R     +    ++++V     R+ D D  +E+T L   Q   Q 
Sbjct: 241 LKAMTSAAAKLGSLSMRIGLQEDFASKLSDSVEKGIGRLVDADMNEESTRLKALQTQQQL 300

Query: 358 SSSVLAQAKQAPNSALAL 375
               L+ A     S L+L
Sbjct: 301 GVQALSIANSNSESILSL 318