Pairwise Alignments

Query, 377 a.a., flagellin C from Vibrio cholerae E7946 ATCC 55056

Subject, 313 a.a., flagellin from Agrobacterium fabrum C58

 Score = 69.7 bits (169), Expect = 1e-16
 Identities = 82/372 (22%), Positives = 140/372 (37%), Gaps = 64/372 (17%)

Query: 4   NVNTNVSAMTAQRYLTSATNAQQSSMERLSSGYKINSAKDDAAGLQISNRLNVQSRGLGV 63
           ++ TN +AM+A + L + +   + +  R+SSG ++ SA D+AA   I+  +   +  L  
Sbjct: 3   SILTNTAAMSALQTLRAISGQLEDTQSRVSSGLRVKSASDNAAYWSIATTMRSDNMALSA 62

Query: 64  AVRNANDGISMAQTAEGAMKETTNILQRMRDLSLQSANGSNSKADRVAIQEEITALNDEL 123
                  G +    A  AM+ T  +   ++++  +    +    D+  IQEEI  L  +L
Sbjct: 63  VQDALGLGAAKVDVAYSAMESTVEV---VKEIKSKIVAATEEGVDKTKIQEEIDQLKKQL 119

Query: 124 NRVAETTSFGGNKLLNGTFATKSFQIGADNGEAVMLNIKDMRSDNALMGGKTYQAANGKD 183
             +A+  SF G   L GT                              G KT  +   +D
Sbjct: 120 ESIAQGASFSGENWLLGT------------------------------GAKTVVSGFVRD 149

Query: 184 KNWGVEAGKTDLTITLKDKREGDVTISINAKEGDDIEELATYINGQTDMIKASVDEEGKL 243
               V   KTD   TL D   G  T              A  + G T    A++D     
Sbjct: 150 GGGTVSVTKTD--YTLIDTTAGTTT--------------ANVLFGLTGS-PATLD----- 187

Query: 244 QLFTDNNRIDGAATFGGALAGELGIGAAQDVTVDTLDVTTVGGAQESVAIVDAALKYVDS 303
              T    I    T  G    ++ +      T  T    T+G     +  V+ A + + S
Sbjct: 188 ---TTKGIIGQPGTASGISVWDIDLKLFNSATPPTY---TIGNL---LTDVETAFQSISS 238

Query: 304 HRAELGAFQNRFNHAINNLDNINENVNASKSRIKDTDFAKETTALTKAQILSQASSSVLA 363
             A LG+ + R     + +  + ++++    R+ D D  +E+T L   Q   Q     L+
Sbjct: 239 ASAALGSIKMRIGLQEDFVSKLTDSIDKGIGRLVDADMNEESTKLKALQTQQQLGIQSLS 298

Query: 364 QAKQAPNSALAL 375
            A  +  + L+L
Sbjct: 299 IANTSSENILSL 310