Pairwise Alignments

Query, 205 a.a., outer membrane lipoprotein LolB from Vibrio cholerae E7946 ATCC 55056

Subject, 205 a.a., membrane protein from Pseudomonas simiae WCS417

 Score = 77.4 bits (189), Expect = 2e-19
 Identities = 58/197 (29%), Positives = 84/197 (42%), Gaps = 20/197 (10%)

Query: 15  LLLLAGCA------TAPLQPVNVQWQSHQVTLEQIQHYQLTGKLGYIAPDQRQSFNFQWQ 68
           + LLAGCA      +   Q    QW+ H+  L  I  +Q+ GK+G  AP    S    W 
Sbjct: 12  IALLAGCAGFGARESVEGQGNPAQWKQHKDKLSSIDGWQIEGKVGVRAPKDSGSGTLFWL 71

Query: 69  KSPQKLSLRLSNFLGQTVLNLQVDEQGARVETYDDQIYRDQDAQSLIRNLTGLDIPVEQL 128
           +      +RLS  LG+    L        +E  +   Y     ++L+    G  +PV  L
Sbjct: 72  QRQDYYDIRLSGPLGRGAARLTGRPGQVSLEVANQGRYEATSPEALLEEQIGWKLPVSHL 131

Query: 129 EDWILGLPT--QATHYELNEQNTLATLTKLASTEEWHVEYQRY--QAIEWQHQPIPLPDK 184
             W+ GLP     +   LN  + LATL +    + W VEY  Y  Q+  W      LP++
Sbjct: 132 VWWVRGLPAPDSKSRLSLNSDSRLATLEQ----DGWQVEYLSYVEQSGYW------LPER 181

Query: 185 LKLQQNKTSIQLVISQW 201
           +KL      + LVI  W
Sbjct: 182 IKLHGTDLDVTLVIKDW 198