Pairwise Alignments

Query, 362 a.a., peptide chain release factor 1 from Vibrio cholerae E7946 ATCC 55056

Subject, 293 a.a., Peptide chain release factor 2; programmed frameshift-containing from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  194 bits (492), Expect = 3e-54
 Identities = 112/291 (38%), Positives = 171/291 (58%), Gaps = 10/291 (3%)

Query: 57  QAKEDLVAAEEMAQEDDAEMREMAQDEIKAAKAAIERLTDELQILLLPKDPNDDRNCFLE 116
           Q  +D+    E+A E D E      +E  A    +E    +L+   +     D  +C+L+
Sbjct: 3   QGLDDVSGLLELAVEADDEE---TFNEAVAELNTLEEKLAQLEFRRMFSGEYDSADCYLD 59

Query: 117 IRAGAGGDEAGIFAGDLFRMYSRFAEKKGWRIEVMSSSEAEHGGYKEMIAKVNGDGAYGT 176
           I+AG+GG EA  +A  L RMY R+AE +G++ EV+  SE E  G K    K++G+ AYG 
Sbjct: 60  IQAGSGGTEAQDWASMLLRMYLRWAEARGFKTEVIEESEGEVAGIKSATIKISGEYAYGW 119

Query: 177 LKFESGGHRVQRVPATEAQGRIHTSACTVAVMPEIPEAEIPEIKASDLKIDTFRSSGAGG 236
           L+ E+G HR+ R    ++ GR HTS  +  V PE+ +    +I  +DL+ID +R+SGAGG
Sbjct: 120 LRTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIDINPADLRIDVYRASGAGG 179

Query: 237 QHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKAMSVLAARIAQAEESKRAAE---IS 293
           QHVN T+SA+RITH+PTGIV +CQ++RSQHKNK +AM  + A++ + E  K+ AE   + 
Sbjct: 180 QHVNRTESAVRITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAME 239

Query: 294 DTRRNLLGSGDRSDRIRTYNYPQGRVSDHRINLTVYRLTEVMEGDMQSLID 344
           DT+ + +G G    +IR+Y     R+ D R  +       V++G +   I+
Sbjct: 240 DTKSD-IGWG---SQIRSYVLDDSRIKDLRTGVETRNTQAVLDGSLDQFIE 286