Pairwise Alignments

Query, 553 a.a., bifunctional UDP-sugar hydrolase/5'-nucleotidase from Vibrio cholerae E7946 ATCC 55056

Subject, 647 a.a., 2',3'-cyclic-nucleotide 2'-phosphodiesterase from Escherichia coli ECOR38

 Score = 92.4 bits (228), Expect = 5e-23
 Identities = 120/580 (20%), Positives = 217/580 (37%), Gaps = 120/580 (20%)

Query: 12  SAAIIASLAGCATAPAQQWEADKTYKLTILHTNDHHGRFWQNQY------GEYGMAARKT 65
           SA ++A+L   +   A       T  L I+ T D H       Y       ++G+    +
Sbjct: 5   SATLLATLIAASVNAA-------TVDLRIMETTDLHSNMMDFDYYKDTATEKFGLVRTAS 57

Query: 66  LIDQLRADIEAQGGSVLLLSGGDINTGVPESDLQDAE--------PDFKGMSKIGYDAMA 117
           LI+  R +++    + +L+  GD+  G P +D   A+        P +K ++ + Y    
Sbjct: 58  LINDARNEVK----NSVLVDNGDLIQGSPLADYMSAKGLKAGDIHPVYKALNTLDYTVGT 113

Query: 118 LGNHEFDNPLEVLFKQKEWANFPMLSANIYDKATGKRLFEPYHIFD---------KQGIK 168
           LGNHEF+  L+ L      A FP ++AN+ D  T + +F PY I D         KQ +K
Sbjct: 114 LGNHEFNYGLDYLKNALVGAKFPYVNANVIDARTKQPMFTPYLIKDTEVVDKDGKKQTLK 173

Query: 169 IAVIGLTTEDTAKIGNPEYIGGIDFRDPKEEAKKVIAELKKKEKPDLIIAVTHMGHYQNG 228
           I  IG+              G +   D  E  +K + E+++K   D+++ + H G     
Sbjct: 174 IGYIGVVPPQIMGWDKANLSGKVTVNDITETVRKYVPEMREK-GADVVVVLAHSG-LSAD 231

Query: 229 EHGVNAPGDVALARYLPAGELDMIVGGHSQEP----VCMEGPNLVKKNFKPGDECKPDIQ 284
            + V A   V     +P     M    H+  P      +EG ++ K              
Sbjct: 232 PYKVMAENSVYYLSEIPGVNAIMFGHAHAVFPGKDFADIEGADIAKGTL----------- 280

Query: 285 NGTYIVQAYEWGKYVGRADYEFRNGELNMVSYNLIPVNLKKKVEVNGETQRVFATSEIK- 343
           NG   V    WG ++G  D +  N                +  +   E + ++  +  K 
Sbjct: 281 NGVPAVMPGMWGDHLGVVDLQLSNDS-----------GKWQVTQAKAEARPIYDIANKKS 329

Query: 344 ---EDSAMLEFLRPFQEKGQEQLSIKIAHSNGKLEGDRNVVRFEQT----NLGRMIAMAH 396
              EDS ++E L+   +  ++ +S  I  S   +     +V+ + T    N  +   + H
Sbjct: 330 LAAEDSKLVETLKADHDATRQFVSKPIGKSADNMYSYLALVQDDPTVQVVNNAQKAYVEH 389

Query: 397 MQRAKADFAVM---------NSGGVRD------SIQAGDITYKDVLKVQPFGNIVSYVDM 441
             +   D A +           GG ++       ++ G +T+++   +  + N +  V  
Sbjct: 390 YIQGDPDLAKLPVLSAAAPFKVGGRKNDPASYVEVEKGQLTFRNAADLYLYPNTLIVVKA 449

Query: 442 NGQEVLDYLNVVA----------TKPVDSGAYAQFAGISMTVADG--------------- 476
           +G+EV ++L   A          TKP     +  F   +  V DG               
Sbjct: 450 SGKEVKEWLECSAGQFNQIDPNSTKPQSLINWDGFRTYNFDVIDGVNYQIDVTQPARYDG 509

Query: 477 ----------KVSNVVIGGKQLRLDATYRFTVPSFNAAGG 506
                     ++ N+   GK +  +A +     ++ A GG
Sbjct: 510 ECQMINANAERIKNLTFNGKPIDPNAMFLVATNNYRAYGG 549