Pairwise Alignments

Query, 417 a.a., uracil permease from Vibrio cholerae E7946 ATCC 55056

Subject, 500 a.a., uracil permease from Pseudomonas simiae WCS417

 Score =  145 bits (365), Expect = 3e-39
 Identities = 114/421 (27%), Positives = 201/421 (47%), Gaps = 39/421 (9%)

Query: 3   NAIQGAQMLFVAFGALVLVPLLTG----LDPN-------VALFGAGLGTLLFQL---ITR 48
           N   G Q +   +G +V VPL+ G    L P         +LF  GL TLL  L      
Sbjct: 21  NMAYGLQHVLTMYGGIVAVPLIVGQAAGLSPADIGLLIAASLFAGGLATLLQTLGLPFFG 80

Query: 49  RSVPIFLASSFAFIAPIMFGIQT---WGIPATMGGLMAAGAVYIVLGGIIKVRGVAIIHK 105
             +P+    SFA +A ++  + +    G+PA +G +MAA  + +++  +      + I K
Sbjct: 81  CQLPLVQGVSFAGVATMVAIVGSDGAGGVPAILGAVMAASFIGLLITPVF-----SRITK 135

Query: 106 LLPPVVVGPVIMVIGLGLAPAAVNMALGKTGDGSVQLVDPQAALWISCISLLVTVVFSVF 165
             PP+V G VI  IGL L P A   A+G  G+         + + ++ ++L++ ++ S  
Sbjct: 136 FFPPLVTGIVITTIGLTLMPVAARWAMG--GNSRAADFGSMSNIGLAALTLVLVLLLSKI 193

Query: 166 AKGFFKLVPILAGIVSGYAVSLVMGVVSFAAVEQAAWLALP---NFTFPEFNINAILFMI 222
                  + IL  +V G  +++ +G+  F+ V Q      P   +F  P F++ AI+ M 
Sbjct: 194 GSATISRLSILLAMVIGTVIAVFLGMADFSGVTQGPMFGFPAPFHFGMPTFHVAAIISMC 253

Query: 223 PVAIAPAVEHVGDMLAISNVTNKDYLKKPGLHRTIAGDGVATMAATMLGAPPNTTYSEVT 282
            V +   VE   D+LA+  + +     K  L   +  D +++M A + G+   + +++  
Sbjct: 254 IVVMVTLVETSADILAVGEIIDTKVDSKR-LGNGLRADMLSSMFAPIFGSFTQSAFAQNV 312

Query: 283 GAVMLTRAFNPAIMTWAAITAIVLALVGKLGALLQTIPVPVMGGIMILLFGSIATVGLNT 342
           G V +T   +  ++    +  ++L L+  +G ++  +P  V+GG  I+LFG++A  G+ T
Sbjct: 313 GLVAVTGVKSRFVVATGGLFLVILGLLPFMGRVIAAVPTSVLGGAGIVLFGTVAASGIRT 372

Query: 343 LIKNQVDLHKSRNLVIVAVTLVFGIGGMA---------FGVGDFSLQGVSLCGIVAIVLN 393
           L K  VD   + NL+IVA ++ FG+  +A                  G+S   I+AI+LN
Sbjct: 373 LSK--VDYRNNMNLIIVATSIGFGMIPIAAPSFYDHFPSWFATIFHSGISSSAIMAILLN 430

Query: 394 L 394
           L
Sbjct: 431 L 431