Pairwise Alignments

Query, 417 a.a., uracil permease from Vibrio cholerae E7946 ATCC 55056

Subject, 496 a.a., Unknown substrate:proton symporter from Variovorax sp. SCN45

 Score =  146 bits (369), Expect = 1e-39
 Identities = 131/483 (27%), Positives = 220/483 (45%), Gaps = 77/483 (15%)

Query: 2   KNAIQGAQMLFVAFGALVLVPLLTG----LDPNVA-------LFGAGLGTLLFQLITRR- 49
           K A  G Q + V +   V VPL+ G    L P+         LF  G+ TL+  L   + 
Sbjct: 21  KLAALGLQHVLVMYAGAVAVPLIVGRALKLTPDEVALLISADLFCCGIATLIQALGATQW 80

Query: 50  ---SVPIFLASSFAFIAPIMFGIQTW----GIPATMGGLMAAGAVYIVLGGIIKVRGVAI 102
               +P+ +  +FA +AP++          G     G ++ AG V I++  +     V+ 
Sbjct: 81  FGIKLPVMMGVTFASVAPMVAIANANPGQNGAQLLFGSIIGAGVVSILIAPL-----VSR 135

Query: 103 IHKLLPPVVVGPVIMVIGLGLAPAAVNMALGK-TGDGSVQLVDPQAALWISCIS------ 155
           + +  PPVV G +I VIG+ L    +N   G   G  +  LVDP  A W++ ++      
Sbjct: 136 MLRFFPPVVTGTIIAVIGISLMRVGINWIFGNPVGPTAPALVDPVYAKWLAEVTSPGSSI 195

Query: 156 -----------------------------LLVTVVFSV-FAKGFFKLVPILAGIVSGYAV 185
                                        +LV+++  V +AKGF   + +L GIV G  V
Sbjct: 196 PAVPKGFAIMPTVPNPKYADLSGFGVATLVLVSILLIVKYAKGFVANISVLLGIVIGAVV 255

Query: 186 SLVMGVVSFAAVEQAAW--LALP-NFTFPEFNINAILFMIPVAIAPAVEHVGDMLAISNV 242
           + + G++++  V +AAW  + LP +F  P+F+   IL M  + I   +E  G  LA+  +
Sbjct: 256 ASITGLMTYEKVGKAAWVDIVLPFHFGMPQFDPILILTMTLIMIVVMIESTGMFLALGEM 315

Query: 243 TNKDYLKKPGLHRTIAGDGVATMAATMLGAPPNTTYSEVTGAVMLTRAFNPAIMTWAAIT 302
           T +   +K  L R +  DG+ T+   +    P T++S+  G V +T   +  +     + 
Sbjct: 316 TGRKIDQKD-LARGLRTDGLGTLIGGVFNTFPYTSFSQNVGLVAVTGIRSRYVCVAGGVI 374

Query: 303 AIVLALVGKLGALLQTIPVPVMGGIMILLFGSIATVGLNTLIKNQVDLHKSR-NLVIVAV 361
            IVL L+ K+ AL++++P  V+GG  +++FG +A  G+  L  + VD   +R N +IVAV
Sbjct: 375 LIVLGLLPKMAALVESLPTVVLGGAGLVMFGMVAATGIRIL--SGVDFKNNRHNAMIVAV 432

Query: 362 TLVFGI---------GGMAFGVGDFSLQGVSLCGIVAIVLNLVLPNDLGENHVVDNAQME 412
           ++  G+           M   +      G+ L  I A++LNL L     +   V  A  +
Sbjct: 433 SIGIGMIPLIAPNFKQWMPHAIHSLIESGILLASIAAVLLNLFLNGAKHDEQAVIAAAKQ 492

Query: 413 EEA 415
            EA
Sbjct: 493 AEA 495