Pairwise Alignments

Query, 417 a.a., uracil permease from Vibrio cholerae E7946 ATCC 55056

Subject, 427 a.a., Pyrimidine permease from Variovorax sp. SCN45

 Score =  256 bits (654), Expect = 9e-73
 Identities = 146/410 (35%), Positives = 223/410 (54%), Gaps = 28/410 (6%)

Query: 1   MKNAIQGAQMLFVAFGALVLVPLLTGLDPNVALFGAGLGTLLFQLITRRSVPIFLASSFA 60
           ++    G Q +   FGA VL P+L G  PN+A+  +G+GTL+F  +T   VP +L SSFA
Sbjct: 27  LQTGAMGVQHVIAMFGATVLAPILMGFSPNIAILMSGIGTLIFYFVTGGKVPSYLGSSFA 86

Query: 61  FIAPIMFGIQTWG------IPATMGGLMAAGAVYIVLGGIIKVRGVAIIHKLLPPVVVGP 114
           FI  ++      G      I   +GG++A G VYI++G +++  G   I + +PPVV G 
Sbjct: 87  FIGVVIAASGYAGKGPNANIAVALGGIVACGVVYILIGALVQAIGTGWIERFMPPVVTGA 146

Query: 115 VIMVIGLGLAPAAV-NMALGKTGDGSVQLVDPQAALWISCISLLVTVVFSVFAKGFFKLV 173
           V+ VIGL LA   + NMA                  W+  ++ L   + +VF +G  + +
Sbjct: 147 VVAVIGLNLASVPIKNMAASNFES------------WMQAVTFLCVGLVAVFTRGMLQRL 194

Query: 174 PILAGIVSGYAVSLV----MGV---VSFAAVEQAAWLALPNFTFPEFNINAILFMIPVAI 226
            IL G++    V  V    MG+   V  + +  AAW+ LP FT P F  NA+L + PVAI
Sbjct: 195 LILVGLILATVVYAVLTNGMGLGKPVDLSGIANAAWVGLPTFTAPVFTANAMLLIAPVAI 254

Query: 227 APAVEHVGDMLAISNVTNKDYLKKPGLHRTIAGDGVATMAATMLGAPPNTTYSEVTGAVM 286
               E++G + A++ +T ++     G  R   GDG+AT+ +   G    TTY+E  G + 
Sbjct: 255 ILVAENLGHLKAVTAMTGRNLDAYMG--RAFIGDGIATVVSGSAGGTGVTTYAENIGVMA 312

Query: 287 LTRAFNPAIMTWAAITAIVLALVGKLGALLQTIPVPVMGGIMILLFGSIATVGLNTLIKN 346
            TR ++ A+   AA+ A+VL    K GAL+Q IP+PVMGG+ I++FG IA  G    + N
Sbjct: 313 ATRIYSTAVFVVAALIALVLGFSPKFGALIQAIPLPVMGGVSIVVFGLIAIAGAKIWVDN 372

Query: 347 QVDLHKSRNLVIVAVTLVFGIGGMAFGVGDFSLQGVSLCGIVAIVLNLVL 396
           +VD  +++NL++ A+TL+ G G      GDF+L G+      AI+L  +L
Sbjct: 373 KVDFSQNKNLIVAAITLIIGTGDFTLKFGDFALGGIGTATFGAIILYALL 422