Pairwise Alignments

Query, 417 a.a., uracil permease from Vibrio cholerae E7946 ATCC 55056

Subject, 442 a.a., pyrimidine permease from Escherichia coli BL21

 Score =  260 bits (664), Expect = 7e-74
 Identities = 153/412 (37%), Positives = 232/412 (56%), Gaps = 26/412 (6%)

Query: 2   KNAIQGAQMLFVAFGALVLVPLLTGLDPNVALFGAGLGTLLFQLITRRSVPIFLASSFAF 61
           + AI G Q     FGA VL+P+L GLDPN+++  +G+GTLLF  IT   VP +L SS AF
Sbjct: 31  QTAIMGVQHAVAMFGATVLMPILMGLDPNLSILMSGIGTLLFFFITGGRVPSYLGSSAAF 90

Query: 62  IAPIMFGIQTWG------IPATMGGLMAAGAVYIVLGGIIKVRGVAIIHKLLPPVVVGPV 115
           +  ++      G      I   +GG++A G VY V+G ++   G   I +L+PPVV G V
Sbjct: 91  VGVVIAATGFNGQGINPNISIALGGIIACGLVYTVIGLVVMKIGTRWIERLMPPVVTGAV 150

Query: 116 IMVIGLGLAPAAVNMALGKTGDGSVQLVDPQAALWISCISLLVTVVFSVFAKGFFKLVPI 175
           +M IGL LAP AV        D            W++ +++L   + +VF +G  + + I
Sbjct: 151 VMAIGLNLAPIAVKSVSASAFDS-----------WMAVMTVLCIGLVAVFTRGMIQRLLI 199

Query: 176 LAGIVSG---YAVSL-VMGV---VSFAAVEQAAWLALPNFTFPEFNINAILFMIPVAIAP 228
           L G++     Y V   V+G+   V F  V  AAW  LP+F+ P FN  A++ + PVA+  
Sbjct: 200 LVGLIVACLLYGVMTNVLGLGKAVDFTLVSHAAWFGLPHFSTPAFNGQAMMLIAPVAVIL 259

Query: 229 AVEHVGDMLAISNVTNKDYLKKPGLHRTIAGDGVATMAATMLGAPPNTTYSEVTGAVMLT 288
             E++G + A++ +T ++    P + R   GDG+ATM +  +G    TTY+E  G + +T
Sbjct: 260 VAENLGHLKAVAGMTGRNM--DPYMGRAFVGDGLATMLSGSVGGSGVTTYAENIGVMAVT 317

Query: 289 RAFNPAIMTWAAITAIVLALVGKLGALLQTIPVPVMGGIMILLFGSIATVGLNTLIKNQV 348
           + ++  +   AA+ A++L    K GAL+ TIP PV+GG  I++FG IA  G    ++N+V
Sbjct: 318 KVYSTLVFVAAAVIAMLLGFSPKFGALIHTIPAPVIGGASIVVFGLIAVAGARIWVQNRV 377

Query: 349 DLHKSRNLVIVAVTLVFGIGGMAFGVGDFSLQGVSLCGIVAIVLNLVLPNDL 400
           DL ++ NL++VAVTLV G G  A  +G F+L G+      AI+LN +L   L
Sbjct: 378 DLSQNGNLIMVAVTLVLGAGDFALTLGGFTLGGIGTATFGAILLNALLSRRL 429