Pairwise Alignments

Query, 484 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 477 a.a., peptidase M48 from Pseudomonas simiae WCS417

 Score =  257 bits (657), Expect = 5e-73
 Identities = 172/483 (35%), Positives = 252/483 (52%), Gaps = 13/483 (2%)

Query: 1   MKFFPTRTLLCLCIAAPCLPAIAQNDPIELPDIGTVAGSTLTIDQELIYGDAYMRMLRNN 60
           M F     L   C+ A   P  A     +LP +G  + + ++  QE   G A++  LR  
Sbjct: 1   MTFLRPTLLTLACLLAS--PGFAD----DLPSLGDASSAIVSPQQEYQLGRAWLAYLRGQ 54

Query: 61  QPVINDPVLNEYIDNLGHRLVASANDVKTPFTFFMIRDRNINAFAFFGGYVALHSGLFLH 120
              +NDP L +Y++   ++LV ++        F +I    +NAFA  GG V ++ GLFL+
Sbjct: 55  VSQLNDPQLKDYVETSVYKLVETSQVNDRRLEFILINSPQLNAFAAPGGIVGVNGGLFLN 114

Query: 121 AQSESELASVMAHEIAHVTQRHLARSMEEQARRSPATIAALAGSLLLAIA-APEAGIAAI 179
           AQ+E E ASV+AHE+AH++QRH AR +E Q R     +AAL G ++ A A A +AGIAAI
Sbjct: 115 AQTEGEYASVLAHELAHLSQRHFARGVEAQQRMQLPMMAALLGGIIAAAAGAGDAGIAAI 174

Query: 180 NATMAGSIQGQINYTRSNEKEADRFGIATLAKAGFDANAMPQFFTRLADEYRYASKPPPM 239
             T A +IQ Q  ++R NE+EADR GI  L KAG+D  +MP  F RL  +YR+ +KPP  
Sbjct: 175 AGTQAAAIQEQRRFSRQNEQEADRIGILNLEKAGYDPRSMPTMFERLMRQYRFDAKPPEF 234

Query: 240 LLTHPLPEDRITDSRERARQYPPLKLAPHLDYHLARARIIARYAGIDADAALDWFARSEK 299
           LLTHP+ E RI D+R RA Q         L Y L RAR+  +Y      AA     R + 
Sbjct: 235 LLTHPVTESRIADTRNRAEQAKTGGKEDSLRYQLIRARVQLQYEDTSGLAA----KRFQA 290

Query: 300 KIDATLQPSI-QYGKALVYLDLKQFDKAEPLLTQLVKEQPDNHFYLDAISDLYIELKQAD 358
           ++D   +  + +YG A+  +   QF +A   L  L+ + P++  Y  A   L I+  +  
Sbjct: 291 QLDENPKNDVARYGLAIAQIKGSQFKQARENLAPLLAKTPNDITYNLAQIQLDIDNGRLP 350

Query: 359 KAQSLLEKALKQTPNNSVLTINYANVLLKQDKFTDAIRILQRYTHDNPNDINGWQLLSEA 418
            AQ   +K L Q P N  L     ++LLKQ++  DA + L       P+D + W  ++E 
Sbjct: 351 DAQQRTDKMLTQYPGNYPLNQIRVDLLLKQNRTADAEKALDSLLKSRPDDPDVWYQVAET 410

Query: 419 NSRLGNSAEDLAARGEIMALQANWNKAIQFYTQASQLVELGSLAQARYDARIDQLMVQRE 478
               GN      AR E  AL  ++ +AIQ    A +         +R DAR  +L +++E
Sbjct: 411 RGLSGNIIGLHQARAEYFALVGDFQQAIQQLDFAKRRAGNNFPLSSRIDARQREL-IEQE 469

Query: 479 RFL 481
           R +
Sbjct: 470 RLV 472