Pairwise Alignments

Query, 484 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 478 a.a., conserved exported protein of unknown function from Pseudomonas putida KT2440

 Score =  258 bits (660), Expect = 2e-73
 Identities = 172/473 (36%), Positives = 250/473 (52%), Gaps = 16/473 (3%)

Query: 8   TLLCLCIAAPCLPAIAQNDPIELPDIGTVAGSTLTIDQELIYGDAYMRMLRNNQPVINDP 67
           TL CL      LP  A     +LP +G  + + ++  QE   G A++ +LR     +NDP
Sbjct: 10  TLACLM----ALPGHAD----DLPSLGDASSAIVSPQQEHQLGRAWLSLLRGQVNQLNDP 61

Query: 68  VLNEYIDNLGHRLVASANDVKTPFTFFMIRDRNINAFAFFGGYVALHSGLFLHAQSESEL 127
            L +Y++   ++L  ++        F +I  R +NAFA  GG V ++ GLFL+AQ+E E 
Sbjct: 62  QLKDYVETSVYKLAETSQLQDRRLEFILIDSRELNAFAAPGGIVGVNGGLFLNAQTEGEY 121

Query: 128 ASVMAHEIAHVTQRHLARSMEEQARRS-PATIAALAGSLLLAIAAPEAGIAAINATMAGS 186
           ASV+AHE+AH++QRH AR +E Q R   P   A LAG +L A  A +AGI  I  T A +
Sbjct: 122 ASVLAHELAHLSQRHFARGVEAQQRMQLPMMAALLAGIVLAAGGAGDAGIGMIAGTQAAA 181

Query: 187 IQGQINYTRSNEKEADRFGIATLAKAGFDANAMPQFFTRLADEYRYASKPPPMLLTHPLP 246
           IQ Q  ++R NE+EADR GI  L KAG+D   MP  F RLA +YRY +KPP  LLTHP+ 
Sbjct: 182 IQEQRRFSRQNEQEADRIGIQNLEKAGYDPRNMPTMFERLARQYRYDAKPPEFLLTHPVT 241

Query: 247 EDRITDSRERARQYPPLKLAPHLDYHLARARIIARYAGIDADAALDWFAR--SEKKIDAT 304
           E RI D+R RA Q P   +   + Y L RAR+   Y G    AA  + A+   + K+DA 
Sbjct: 242 ESRIADTRNRADQAPKGGIEDSMRYQLIRARVALIYEGTPGLAAKRFRAQLDEDPKLDAA 301

Query: 305 LQPSIQYGKALVYLDLKQFDKAEPLLTQLVKEQPDNHFYLDAISDLYIELKQADKAQSLL 364
                +YG AL  +   Q ++A  +L  L+ + P++  Y  A  DL I   +   AQ   
Sbjct: 302 -----RYGLALAQVKGGQLNEAREMLKPLLAKAPNDITYNLAQIDLDITNNRLADAQQRA 356

Query: 365 EKALKQTPNNSVLTINYANVLLKQDKFTDAIRILQRYTHDNPNDINGWQLLSEANSRLGN 424
           E+     P N  L    A++L+KQ+K  +A ++L       P+D + W  ++E     GN
Sbjct: 357 ERMQGLYPGNYPLKQVRADLLVKQNKPAEAEKVLNELVKSRPDDPDVWYDMAEVRGLSGN 416

Query: 425 SAEDLAARGEIMALQANWNKAIQFYTQASQLVELGSLAQARYDARIDQLMVQR 477
           +     AR E   L  ++++AIQ    A +         ++ D R  ++M QR
Sbjct: 417 TIGLHRARAEYFTLVGDFDQAIQQLDYAKRRAGGNFPLASQIDQRQREIMEQR 469