Pairwise Alignments

Query, 354 a.a., AI-2E family transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 619 a.a., hypothetical protein from Xanthobacter sp. DMC5

 Score = 85.1 bits (209), Expect = 4e-21
 Identities = 82/356 (23%), Positives = 160/356 (44%), Gaps = 47/356 (13%)

Query: 30  ITIYFFGH-LIAPLLVAIVLAYLLEWPVTQLRRLRIPRTLA-VIIVITVFTGLMILAVFG 87
           +T+ + G  +  P+ VAI+L+++L   +  LRR+R+PRT A V++VI  F GL+ L    
Sbjct: 34  VTVLYVGRDVFVPIAVAILLSFVLAPVILVLRRVRVPRTAAAVVVVIATFVGLLALG--- 90

Query: 88  LVPTIWKQVGNLINDVPNMYNGTQKFITSLPERYPELAHLEIVESVIGNAKNKVLGMGES 147
               I  Q  +L+ ++P       + I S+ E        E    +I +   ++     +
Sbjct: 91  --SVIALQTSDLVAELPKYRFNLSEKIRSVKEATGGSGTFERTMDMIQDLGRELEAPDPA 148

Query: 148 -VVK-------------------------GSLASLVS-----LATLGVYLILVPLLVFFL 176
             VK                         G+L+++++     LAT+G+  I V   +F L
Sbjct: 149 KAVKEEGGPFATGGRPLPVEIRQPPPGTLGTLSTVMAPLLHPLATIGIIFIFV---LFIL 205

Query: 177 LKDKQEMLRMASGILPRNRKLANKVWEEMNQQISNYIRGKVLEIVIVGTVSYITFAILDL 236
           L+ +    R        + +      ++  +++S +   +V      GTV  +   ++ +
Sbjct: 206 LQREDLRNRFVRLAGAHDMQRTTAALDDAARRLSRFFLTQVALNAAFGTVIGVGLWLIGV 265

Query: 237 RYSVLLAVAVGLSVLIPYIGAAAVTVPVAIVALFQWGLTPQFYTLLIAYG---IIQALDG 293
              +L  +A  +   +PY+GAA   V  A+   F   + P +  +L A+    +++ L G
Sbjct: 266 PSPLLFGIAAAVLRFVPYVGAA---VAAALPIGFALAVDPGWTMVLSAFALFIVVEPLVG 322

Query: 294 NVLVPVLFSEAVNLHPVAIIIAVLVFGGLWGFWGVFFAIPLATLVKAVWKALPSID 349
           +V+ P+L+  +  L PVA+I A   +  LWG  G+  + PL   +  + + + S++
Sbjct: 323 HVIEPLLYGRSTGLSPVAVIAAATFWTWLWGPIGLLLSTPLTLCLVVLGRHVESLE 378