Pairwise Alignments

Query, 354 a.a., AI-2E family transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 403 a.a., hypothetical protein from Xanthobacter sp. DMC5

 Score =  129 bits (324), Expect = 1e-34
 Identities = 83/330 (25%), Positives = 166/330 (50%), Gaps = 23/330 (6%)

Query: 22  VAILLFGFITIYFFGHLIAPLLVAIVLAYLLEWPVTQLRRLRIPRTLAVIIVITVFTGLM 81
           V  LL   I ++    ++ P +  IVLAY L   V +L R+ + RTL+ ++V+ +   L+
Sbjct: 52  VGALLLTAIVLWLLSGILLPFVAGIVLAYFLNPVVARLERIGVARTLSALVVVGIMLLLV 111

Query: 82  ILAVFGLVPTIWKQVGNLINDVPNMYNGTQKFITS---------LPERYPELAHLEIVES 132
           +L     +P +  Q+   I  +P+     Q  +T          + +R P++     +  
Sbjct: 112 MLFFLLALPILSSQLFEFIQRLPSYVTRLQGLLTEENREWLSGIVGDRLPDMQRS--ISD 169

Query: 133 VIGNAKNKVLGMGESVVKGSLASLVSLATLGVYLILVPLLVFFLLKDKQEMLRMASGILP 192
           ++    + VL +  SV  G  A    L +L   L++ P++VF++L D  EM+ +   ++P
Sbjct: 170 LMTQGVSHVLSLLSSVWSGGQA----LLSLFALLVVTPVVVFYILCDWNEMVGLVDRLVP 225

Query: 193 -RNRKLANKVWEEMNQQISNYIRGKVLEIVIVGTVSYITFAILDLRYSVLLAVAVGLSVL 251
             +R +   +   M+  ++ ++RG+    +++G    ++ +++ L + +L+ +  G+   
Sbjct: 226 VPHRPVVRGLARAMDNAVAGFVRGQATVCLLLGGFYAVSLSMVGLNFGLLIGIVSGVITF 285

Query: 252 IPYIGAAA---VTVPVAIVALF-QWGLTPQFYTLLIAYGIIQALDGNVLVPVLFSEAVNL 307
           IPY+G+     + + VAIV  F  W +      + +A    Q ++G VL P L  +++ +
Sbjct: 286 IPYVGSLTGFVLAMGVAIVQFFPDWSMIGTVLAIFVAG---QTIEGYVLAPKLVGDSIGV 342

Query: 308 HPVAIIIAVLVFGGLWGFWGVFFAIPLATL 337
           HPV ++ A+  FG L+GF G+  A+PL  +
Sbjct: 343 HPVWLMFALFAFGYLFGFVGLLLAVPLTAV 372