Pairwise Alignments

Query, 354 a.a., AI-2E family transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 354 a.a., conserved membrane protein of unknown function from Pseudomonas putida KT2440

 Score = 60.1 bits (144), Expect = 9e-14
 Identities = 74/331 (22%), Positives = 134/331 (40%), Gaps = 16/331 (4%)

Query: 25  LLFGFITIYFFGHLIAPLLVAIVLAYLLEWPVTQLRRLRI-----PRTLAVIIVITVFTG 79
           +L   +TI FF  L+ P   AI  A +L      L+R  +      R LA      V   
Sbjct: 13  VLLALVTIAFFWILL-PYYGAIFWAVILGILFAPLQRHLLIRCGRRRNLAAATSTLVCLL 71

Query: 80  LMILAVFGLVPTIWKQVGNLINDVPNMYNGTQKFITSLPERYPELAHLEIVESVIGNAKN 139
           + IL V  +   + ++   L   + +       ++    +  P  A   +    +GN   
Sbjct: 72  VAILPVIIISALLVQEGATLYQRIESGQLDIAGYVERGKDMLPAFAQRGLDNMGMGNLDG 131

Query: 140 KVLGMGESVVKGS--LASLVSLATLGVYLILVPL-----LVFFLLKDKQEMLRMASGILP 192
               + +   +GS  LAS       G +  L+       L+FF L+D  E+ R     +P
Sbjct: 132 LRDKITKWATQGSQVLASQAFSFGQGTFEFLISFGIMMYLLFFFLRDGPEVARRVRMAVP 191

Query: 193 RNRKLANKVWEEMNQQISNYIRGKVLEIVIVGTVSYITFAILDLRYSVLLAVAVGLSVLI 252
                  ++  + N+ +   ++G VL  +  G +    F +LD+  +++ AV +    L+
Sbjct: 192 LPEHQKRRLQLKFNRVVRATVKGNVLVAITQGALGGFIFWVLDIPSALVWAVLMAFLSLL 251

Query: 253 PYIGAAAVTVPVAIVALFQWGLTPQFYTLLIAYGI-IQALDGNVLVPVLFSEAVNLHPVA 311
           P +GA  +  PVA   L    +      +L A+G+ +  L  NVL P+L  +   +    
Sbjct: 252 PAVGAGIIWAPVAAYFLLTGAILQG--VVLTAFGVLVIGLVDNVLRPILVGKDTRMPDYL 309

Query: 312 IIIAVLVFGGLWGFWGVFFAIPLATLVKAVW 342
           I+++ L    ++G  G      +A L  + W
Sbjct: 310 ILVSTLGGLAVFGLNGFVIGPLIAALFVSSW 340