Pairwise Alignments

Query, 354 a.a., AI-2E family transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 356 a.a., putative permease from Pseudomonas putida KT2440

 Score =  348 bits (892), Expect = e-100
 Identities = 179/353 (50%), Positives = 239/353 (67%), Gaps = 2/353 (0%)

Query: 1   MFEMVSRWYKRRFSDPHAASLVAILLFGFITIYFFGHLIAPLLVAIVLAYLLEWPVTQLR 60
           MF+++  W +R FSD  A  L  +L   F  +   G ++AP+L  +VLA+L++  V  L 
Sbjct: 1   MFKVLRDWVQRYFSDEEAVVLAVLLFLAFTAVLTLGGMLAPVLAGMVLAFLMQGLVNALE 60

Query: 61  RLRIPRTLAVIIVITVFTGLMILAVFGLVPTIWKQVGNLINDVPNMYNGTQKFITSLPER 120
           R+R+P  LAV++V  +F G + + +  LVP +W Q+  L N++P M    Q  +  LPER
Sbjct: 61  RVRVPTRLAVMLVFALFMGALAVFMLVLVPLLWHQLITLFNELPGMLGKWQSLLLLLPER 120

Query: 121 YPELAHLEIVESVIGNAKNKVLGMGESVVKGSLASLVSLATLGVYLILVPLLVFFLLKDK 180
           YP L   E V   I + + ++   G+  +  SL+SL  L    +YL+LVP+LVFF LKD+
Sbjct: 121 YPHLVSDEQVLHAIESVRGEIGKFGQWALTFSLSSLPLLVNAMIYLVLVPILVFFFLKDR 180

Query: 181 QEMLRMASGILPRNRKLANKVWEEMNQQISNYIRGKVLEIVIVGTVSYITFAILDLRYSV 240
           + + R  SG LPR R L N+V  EMN+QI+NYIRGK +EI+I G  +YI F  L L Y+ 
Sbjct: 181 ELIGRWVSGYLPRQRTLLNRVGSEMNRQIANYIRGKGIEILICGIATYIAFISLGLNYAA 240

Query: 241 LLAVAVGLSVLIPYIGAAAVTVPVAIVALFQWGLTPQFYTLLIAYGIIQALDGNVLVPVL 300
           LLA+ VGLSV++PY+GA  VTVPV ++ALFQWG   QF  L+  Y IIQALDGNVLVP+L
Sbjct: 241 LLALLVGLSVVVPYVGAVVVTVPVTLIALFQWGWGDQFIYLMTVYAIIQALDGNVLVPLL 300

Query: 301 FSEAVNLHPVAIIIAVLVFGGLWGFWGVFFAIPLATLVKAVWKALPSIDEEPA 353
           FSEAV+LHPVAII AVL+FGGLWGFWG+FFAIPLATL+KAV  A P   +EP+
Sbjct: 301 FSEAVSLHPVAIICAVLLFGGLWGFWGIFFAIPLATLIKAVLDAWPK--QEPS 351