Pairwise Alignments

Query, 354 a.a., AI-2E family transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 358 a.a., AI-2E family transporter from Magnetospirillum magneticum AMB-1

 Score =  133 bits (334), Expect = 8e-36
 Identities = 87/313 (27%), Positives = 154/313 (49%), Gaps = 4/313 (1%)

Query: 30  ITIYFFGHLIAPLLVAIVLAYLLEWPVTQLRRLRIPRTLAVIIVITVFTGLMILAVFGLV 89
           + +Y    ++ P +  + +AY L+    ++ R  + RTLA  I+  VF G+M L +  L 
Sbjct: 19  VLLYMLRSVMLPFVAGMAVAYFLDPLADRMERAGLSRTLATAIICLVFFGVMGLGLTLLA 78

Query: 90  PTIWKQVGNLINDVPNMYNGTQ-KFITSLPERYPELA--HLEIVESVIGNAKNKVLGMGE 146
           P I +QV   +  VP      Q + +  L E Y  L+   LE + S  G      +G G 
Sbjct: 79  PIIQQQVVTFVQKVPVYAQSLQTRAMPLLEEVYRHLSPEDLEKLRSSAGAYAGTAVGWGL 138

Query: 147 SVVKGSLASLVSLATLGVYLILVPLLVFFLLKDKQEMLRMASGILPRNRKLANKV-WEEM 205
            V+KG L+  +++ ++   L + P++ F+LL+D   M+      LPR+     +    E+
Sbjct: 139 GVLKGVLSGGIAVMSILSLLFITPVVTFYLLRDWDHMVAKVDNWLPRHHAETIRFELREI 198

Query: 206 NQQISNYIRGKVLEIVIVGTVSYITFAILDLRYSVLLAVAVGLSVLIPYIGAAAVTVPVA 265
           ++ I+ ++RG+    +++     +   I  L   +++ +  GL   +PY+G     +   
Sbjct: 199 DRTIAGFVRGQATVCIVLAIFYGVGLTITGLDLGLMIGLGTGLGAFVPYVGMLIGLIASV 258

Query: 266 IVALFQWGLTPQFYTLLIAYGIIQALDGNVLVPVLFSEAVNLHPVAIIIAVLVFGGLWGF 325
            +AL Q G       + I + I   L+GN L P L  + V LHPV II ++L  G L+GF
Sbjct: 259 GLALAQGGEWHLLGGVGIVFLIGNVLEGNFLTPKLVGDRVGLHPVWIIFSLLAGGALFGF 318

Query: 326 WGVFFAIPLATLV 338
            G+  A+P A+++
Sbjct: 319 VGILLAVPAASVI 331