Pairwise Alignments

Query, 354 a.a., AI-2E family transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 344 a.a., AI-2 transporter TqsA from Escherichia coli ECRC98

 Score = 87.0 bits (214), Expect = 6e-22
 Identities = 85/330 (25%), Positives = 151/330 (45%), Gaps = 37/330 (11%)

Query: 21  LVAILLFGFITIYFFGHLIAPLLVAIVLAYLLEWPVTQLRRLRIPRTLAVIIVITVFTGL 80
           ++ I+L G   I F   +I P ++A+ +A +L   V  + R R+PR LAV I++T+    
Sbjct: 19  MLVIILCG---IRFAAEIIVPFILALFIAVILNPLVQHMVRWRVPRVLAVSILMTIIVMA 75

Query: 81  MILAVFGLVPTIWKQVGNLINDVPNMYNGTQKFITSLPERYPELAHLEIVESVIGNAKNK 140
           M+L    L+  +   +  L   +P   N     +T L    P L  + I  SV     + 
Sbjct: 76  MVL----LLAYLGSTLNELTRTLPQYRN---SIMTPLQALEPLLQRVGIDVSV-DQLAHY 127

Query: 141 VLGMGESVVKGSLASLVSLATLGVYLILVPLLVFFLL-------KDKQEMLRMASGILPR 193
           +       +  +L + +S A   ++L+L+ +L F LL       K KQ M R   G+   
Sbjct: 128 IDPNAAMTLLTNLLTQLSNAMSSIFLLLLTVL-FMLLEVPQLPGKFKQMMARPVEGMAAI 186

Query: 194 NRKLANKVWEEMNQQISNYIRGKVLEIVIVGTVSYITFAILDLRYSVLLAVAVGLSVLIP 253
            R +           +S+Y+  K    +I G V++   A LD+R++ +  +       IP
Sbjct: 187 QRAI---------DSVSHYLVLKTAISIITGLVAWAMLAALDVRFAFVWGLLAFALNYIP 237

Query: 254 YIGAAAVTV-PVAIVALFQWGLTPQFYTLLI---AYGIIQALDGNVLVPVLFSEAVNLHP 309
            IG+    + P+A V +F       FY  L+    Y +I  + GN+L P +    + L  
Sbjct: 238 NIGSVLAAIPPIAQVLVFN-----GFYEALLVLAGYLLINLVFGNILEPRIMGRGLGLST 292

Query: 310 VAIIIAVLVFGGLWGFWGVFFAIPLATLVK 339
           + + ++++ +G L G  G+  ++PL  +VK
Sbjct: 293 LVVFLSLIFWGWLLGPVGMLLSVPLRIIVK 322