Pairwise Alignments

Query, 354 a.a., AI-2E family transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 349 a.a., Putative transport protein YhhT from Escherichia coli ECRC62

 Score = 78.2 bits (191), Expect = 3e-19
 Identities = 75/327 (22%), Positives = 151/327 (46%), Gaps = 23/327 (7%)

Query: 19  ASLVAILLFGFITIYFFGHLIAPLLVAIVLAYLLEWPVTQLRRLRIPRTLAVIIVITVFT 78
           ASLV IL      I+    +I  LL+A+  A +L   VT   R  + R +A+ IV+ V  
Sbjct: 18  ASLVVILA----GIHAAADIIVQLLLALFFAIVLNPLVTWFIRRGVQRPVAITIVVVV-- 71

Query: 79  GLMILAVFGLVPTIWKQVGNLINDVPNMYNGTQKFITSLPERYPEL-AHLEIVESVIGNA 137
             M++A+  LV  +       I+ +P       + +  L E  P L  H+     +    
Sbjct: 72  --MLIALTALVGVLAASFNEFISMLPKFNKELTRKLFKLQEMLPFLNLHMSPERMLQRMD 129

Query: 138 KNKVLGMGESVVKGSLASLVSLATLGVYLILVPLLVFFLLKDKQEMLRMASGILPRNRKL 197
             KV+    +++ G   ++ S+      L+LV  +VF L + +    +M   +   N ++
Sbjct: 130 SEKVVTFTTALMTGLSGAMASV------LLLVMTVVFMLFEVRHVPYKMRFAL--NNPQI 181

Query: 198 ANKVWEEMNQQISNYIRGKVLEIVIVGTVSYITFAILDLRYSVLLAVAVGLSVLIPYIGA 257
                    + +S+Y+  K L  +  G + ++   ++ ++++++ AV   L   +P IGA
Sbjct: 182 HIAGLHRALKGVSHYLALKTLLSLWTGVIVWLGLELMGVQFALMWAVLAFLLNYVPNIGA 241

Query: 258 AAVTVPVAIVALFQWGLTPQFYTLLIA--YGIIQALDGNVLVPVLFSEAVNLHPVAIIIA 315
               VP  I  L   G+   +  +L+   + ++  + GN+L P +    + +  + + ++
Sbjct: 242 VISAVPPMIQVLLFNGI---YECILVGALFLVVHMVIGNILEPRMMGHRLGMSTMVVFLS 298

Query: 316 VLVFGGLWGFWGVFFAIPLATLVKAVW 342
           +L++G L G  G+  ++PL ++ K +W
Sbjct: 299 LLIWGWLLGPVGMLLSVPLTSVCK-IW 324