Pairwise Alignments

Query, 623 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 544 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  221 bits (564), Expect = 5e-62
 Identities = 132/355 (37%), Positives = 212/355 (59%), Gaps = 2/355 (0%)

Query: 250 WYIGA-VVDESIAFAMVDDLRHSSLIYTVIGVLLSIIGLSFLIKVLMKPLGALSRAIEDV 308
           W IG+ V  + +       +  +S I   I ++++++ +S + + +++PL A   A+ ++
Sbjct: 171 WIIGSGVYVDDVQAEFSSQVWKASFIGLAIALVMALL-VSLIARSIVRPLQAAVNAMGNI 229

Query: 309 ASGQGDLTKRLDTNTDMEFAILAKDFNVFCETLQKRIQHLKGIGAEIMHGTEQTVLGAHE 368
           ASG+ DLT+ LDT+   E   L++ FN F   L++ +  L+     +   +++    A +
Sbjct: 230 ASGESDLTRSLDTHGQDEVTQLSRHFNSFTAKLRQVVGQLQVCANALGQSSQELGSNATQ 289

Query: 369 SASAMAQQLQELEQLATAMHEMAVTATEVANNAQGAAAAAHEADEASQDGSKVVSDTTRS 428
           +     QQ Q++E +ATA++E+     +VA NA+ AA+   +A   +Q G   +  + + 
Sbjct: 290 AHDRSQQQSQQMELVATAINEVTYGVQDVAKNAEHAASEMRDAQAQAQQGQVNIDSSLQQ 349

Query: 429 IDALSARIEQAVEEVKGLEVATGNIETILKVINDIADQTNLLALNAAIEAARAGESGRGF 488
           ID LS  I QAVE ++ L   +  I ++L+VI  IADQTNLLALNAAIEAARAGE GRGF
Sbjct: 350 IDQLSGTISQAVEVIRTLSAESTQIGSVLEVIRSIADQTNLLALNAAIEAARAGEQGRGF 409

Query: 489 AVVADEVRTLAQRTQQSTTEIRNMIEQLQSGASAVSAAMNESKYTADDAVQKAQLANESL 548
           AVVADEVR LAQRTQ+ST EI+ MIE+LQ  + A    +++S   +   +++A  A  SL
Sbjct: 410 AVVADEVRLLAQRTQKSTAEIQGMIERLQGHSEAAVKVISDSHSASQMTIEQAGQAGASL 469

Query: 549 QRIRGAIQRISDMNMQIASAAEEQSLVAEEINTNTVKIKDLSTQVADSAKSASMA 603
             I  +++ ++ +N  IASA  +Q+ V E+IN N  +   LS   A +A+ +S+A
Sbjct: 470 TAIGESLRNLNGLNASIASATLQQAHVVEDINQNVTEAAGLSHSTALAAEQSSVA 524