Pairwise Alignments

Query, 623 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 559 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  231 bits (590), Expect = 5e-65
 Identities = 153/407 (37%), Positives = 224/407 (55%), Gaps = 15/407 (3%)

Query: 215 FSQFLPNVDLKEGTQRIELDGKYYLVKFAQVPSESWYIGAVVDESIAFAMVDDLRHSSLI 274
           ++++LP  D+  GT  + LDG       AQV        AVV+  +   M   L     +
Sbjct: 166 YTEYLPKWDMVIGTS-VNLDGIE-----AQV--------AVVEAKVQKRMEGVLLSILGV 211

Query: 275 YTVIGVLLSIIGLSFLIKVLMKPLGALSRAIEDVASGQGDLTKRLDTNTDMEFAILAKDF 334
             V+ ++++ +G+  L   +++PL  +   ++D+A+G+GDLT+RL   +  E   LA  F
Sbjct: 212 AVVLLLVIAAVGM-LLANTILRPLHLMKANLDDIAAGEGDLTRRLAITSQDELGDLAGAF 270

Query: 335 NVFCETLQKRIQHLKGIGAEIMHGTEQTVLGAHESASAMAQQLQELEQLATAMHEMAVTA 394
           N F + +   ++ +  + +++     Q    A  S  AM +Q  E +Q+ATA+++M+  A
Sbjct: 271 NRFVDKIHGLVRQITEMTSQLTGLVSQVSDQAQRSEQAMERQRHETDQVATAINQMSSAA 330

Query: 395 TEVANNAQGAAAAAHEADEASQDGSKVVSDTTRSIDALSARIEQAVEEVKGLEVATGNIE 454
            EVA +AQGA+ AA + D   Q   +VV  +   I AL   I  +   +  L+    +I 
Sbjct: 331 QEVARSAQGASVAAQQTDAEGQAAKRVVDGSIAQIHALVNDIRSSGVSLDSLQQDVSSIV 390

Query: 455 TILKVINDIADQTNLLALNAAIEAARAGESGRGFAVVADEVRTLAQRTQQSTTEIRNMIE 514
           ++L VI  IA+QTNLLALNAAIEAARAGE+GRGFAVVADEVR LA RTQ ST EI+ MI+
Sbjct: 391 SVLSVIRSIAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRALASRTQTSTQEIQGMID 450

Query: 515 QLQSGASAVSAAMNESKYTADDAVQKAQLANESLQRIRGAIQRISDMNMQIASAAEEQSL 574
           +LQ+G  A   AM  S    D    +A  A  SL  +   I  I+ MN QIASAAEEQ+ 
Sbjct: 451 RLQTGTEAAVEAMRRSSDAGDGTSAQANEAGASLDTMAQLIGTINSMNAQIASAAEEQTA 510

Query: 575 VAEEINTNTVKIKDLSTQVADSAKSASMAMEVQTENVREQGKLLNTF 621
           VAEEIN +  +I      VAD  +  +       E  +  G+L+  F
Sbjct: 511 VAEEINRSVHQIAVAVDSVADETQLGAQTSRSLAELGQRLGQLVGQF 557