Pairwise Alignments

Query, 623 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 624 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  701 bits (1810), Expect = 0.0
 Identities = 369/625 (59%), Positives = 472/625 (75%), Gaps = 3/625 (0%)

Query: 1   MRFSQKIVAASSALLLCVIALLSFQQLSTVREEIESLVQDSLMEMVKGVKNTIESDLASK 60
           M+FS KIVAASS LLL  +ALLS  Q   VR+EI S+V DS+ E+V GV  T    +  +
Sbjct: 1   MKFSHKIVAASSVLLLATVALLSGSQYFKVRDEIRSMVSDSVDEIVDGVSKTTAEVINGR 60

Query: 61  KGLAQSTTEILQLDPTNKAFAKSVLESPNLKGSFLAIGLGYESDATVVENDDGWEPNADY 120
           K +AQ  T +++ +P      ++++  P +K +FL +G G E D + + ND  W P   +
Sbjct: 61  KSIAQYATSLIENNPEPDN-VRTIISQPLIKNTFLLVGFGLEKDGSNINNDPSWNPGPTW 119

Query: 121 DPRKRPWYVDAKRERKLVVTEPYVDISTKKIIISIGTPVYQQSN--FVGAMFYDVELTQL 178
           DPR RPWY DAK   KLV+T PY D ++ +I++S+ TPV   +   F+G++FYDV L +L
Sbjct: 120 DPRVRPWYKDAKNAGKLVITAPYADSASGEILVSVATPVKDSATGQFLGSIFYDVSLAEL 179

Query: 179 AQLVNSVNLFDAGYLFITTKDGVTIAHPNAENNGEKFSQFLPNVDLKEGTQRIELDGKYY 238
           A+LVN V LFDAGY+FI ++DG TIAHP  E NG+  S+FL    +   T ++ ++GK Y
Sbjct: 180 AELVNEVKLFDAGYVFIVSEDGTTIAHPKKEFNGKPMSEFLGESKINVDTHQVIINGKPY 239

Query: 239 LVKFAQVPSESWYIGAVVDESIAFAMVDDLRHSSLIYTVIGVLLSIIGLSFLIKVLMKPL 298
            V F+ V  E WY+G V+DE IA+A +D+LR S+LI+TVI +++S+  L F+++VLMKPL
Sbjct: 240 AVSFSDVEGEDWYVGVVIDEEIAYAALDELRRSTLIFTVIALVISVFVLLFIVRVLMKPL 299

Query: 299 GALSRAIEDVASGQGDLTKRLDTNTDMEFAILAKDFNVFCETLQKRIQHLKGIGAEIMHG 358
             L+ AI++VASG+GDLT+RL TNTD EFA LA  FN F ETLQK++   K IGAEI+ G
Sbjct: 300 DTLNDAIQNVASGEGDLTQRLSTNTDEEFAKLAIGFNTFTETLQKQLIQSKAIGAEILRG 359

Query: 359 TEQTVLGAHESASAMAQQLQELEQLATAMHEMAVTATEVANNAQGAAAAAHEADEASQDG 418
           +E T +   +SA AM  QL ELEQLATAMHEMA T+++VANNAQGAA+AA  AD+A+  G
Sbjct: 360 SESTSMTLQQSAEAMRSQLHELEQLATAMHEMATTSSDVANNAQGAASAAKVADDAAAAG 419

Query: 419 SKVVSDTTRSIDALSARIEQAVEEVKGLEVATGNIETILKVINDIADQTNLLALNAAIEA 478
           + VV+ TT++ID LSA I+ AV++VK LE AT NIET+LKVINDIADQTNLLALNAAIEA
Sbjct: 420 TDVVTKTTKAIDTLSATIDAAVDDVKVLESATANIETVLKVINDIADQTNLLALNAAIEA 479

Query: 479 ARAGESGRGFAVVADEVRTLAQRTQQSTTEIRNMIEQLQSGASAVSAAMNESKYTADDAV 538
           ARAGESGRGFAVVADEVRTLAQRTQQSTTEIRNMIE+LQSGA+AV+ AM+ SK TA  AV
Sbjct: 480 ARAGESGRGFAVVADEVRTLAQRTQQSTTEIRNMIEKLQSGANAVAVAMSHSKDTAASAV 539

Query: 539 QKAQLANESLQRIRGAIQRISDMNMQIASAAEEQSLVAEEINTNTVKIKDLSTQVADSAK 598
            +AQ ANE+L++IR AIQ+ISDMN+QIASAAEEQSLVAEEIN NTVKIKDLS QVA+SA 
Sbjct: 540 NQAQGANEALEKIRLAIQQISDMNIQIASAAEEQSLVAEEINNNTVKIKDLSDQVAESAD 599

Query: 599 SASMAMEVQTENVREQGKLLNTFIV 623
            A+M+M++QTEN+REQ  +LN F V
Sbjct: 600 EANMSMQIQTENIREQDAILNKFKV 624