Pairwise Alignments

Query, 623 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 626 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  554 bits (1427), Expect = e-162
 Identities = 293/620 (47%), Positives = 415/620 (66%), Gaps = 1/620 (0%)

Query: 3   FSQKIVAASSALLLCVIALLSFQQLSTVREEIESLVQDSLMEMVKGVKNTIESDLASKKG 62
           F +K++  SS +LL  +A + ++  +T ++E+  +++D + E++   +  +   L S   
Sbjct: 5   FVKKLIFISSFILLVTVAFVVWEGYTTAKKEVSVVIEDGINEIINKTERFVSLKLESDIS 64

Query: 63  LAQSTTEILQLDPTNKAFAKSVLESPNLKGSFLAIGLGYESDATVVENDDGWEPNADYDP 122
           LA S  + + L  +++ +   ++    +K +FL+ G G++S+  V+END  WEP  DYDP
Sbjct: 65  LASSIVDSISLRISDEQYINDIINGNAIKKAFLSTGFGFDSNGKVIENDPNWEPEDDYDP 124

Query: 123 RKRPWYVDAKRERKLVVTEPYVDISTKKIIISIGTPVYQ-QSNFVGAMFYDVELTQLAQL 181
           R R WY +AK+ +++ +TEPY+D   K  ++SI +PV    +NF+GAM++DV+L+++ + 
Sbjct: 125 RSRGWYQEAKKNKRIFITEPYLDTEGKNFLVSISSPVADTMNNFIGAMYFDVDLSRIQKN 184

Query: 182 VNSVNLFDAGYLFITTKDGVTIAHPNAENNGEKFSQFLPNVDLKEGTQRIELDGKYYLVK 241
           V+ +NLF+AGY+FIT+  G  I H N +  G+          L +G   + ++G    + 
Sbjct: 185 VDDINLFEAGYVFITSNTGKVIIHSNTDELGKNVKDIYNGFRLDKGKVVLSVNGVNKWLY 244

Query: 242 FAQVPSESWYIGAVVDESIAFAMVDDLRHSSLIYTVIGVLLSIIGLSFLIKVLMKPLGAL 301
            + +    W+I AV+DESIA   ++ +++  + Y+ IG++   + L F+++ LM PL  L
Sbjct: 245 TSPILGGDWFIIAVIDESIAMQSINKMKYELIFYSAIGLVFGGLILVFILRRLMSPLKTL 304

Query: 302 SRAIEDVASGQGDLTKRLDTNTDMEFAILAKDFNVFCETLQKRIQHLKGIGAEIMHGTEQ 361
             AI+D+ASG GDLTK+LDTN D EF+ LA  FN F E L  +I+ LK I + ++ G E+
Sbjct: 305 DSAIKDIASGGGDLTKKLDTNLDKEFSELALGFNSFTEMLGSQIRQLKTIASGVLDGAEK 364

Query: 362 TVLGAHESASAMAQQLQELEQLATAMHEMAVTATEVANNAQGAAAAAHEADEASQDGSKV 421
           T   A  S   + QQLQELEQLATAM+EMA+TA+EVAN+AQ AA AA E + AS +GS V
Sbjct: 365 TANEAEVSRLVVEQQLQELEQLATAMNEMAMTASEVANSAQVAADAAKEGESASLEGSSV 424

Query: 422 VSDTTRSIDALSARIEQAVEEVKGLEVATGNIETILKVINDIADQTNLLALNAAIEAARA 481
           V +TT +I  LS RI  +VE+VK L  AT  IET+L VINDIADQTNLLALNAAIEAARA
Sbjct: 425 VHETTDAIQRLSIRIGSSVEDVKELVKATDRIETVLDVINDIADQTNLLALNAAIEAARA 484

Query: 482 GESGRGFAVVADEVRTLAQRTQQSTTEIRNMIEQLQSGASAVSAAMNESKYTADDAVQKA 541
           GESGRGFAVVADEVRTLAQRTQQST +I  +IEQLQ GA  VS +M+ESK   D  V+K 
Sbjct: 485 GESGRGFAVVADEVRTLAQRTQQSTMQISEIIEQLQEGAKNVSRSMDESKLETDIVVEKT 544

Query: 542 QLANESLQRIRGAIQRISDMNMQIASAAEEQSLVAEEINTNTVKIKDLSTQVADSAKSAS 601
              NE +  ++ AI RISDMN+QIASAAEEQSLVAEEIN NTV IKDLS +++++A +A 
Sbjct: 545 NQVNEKISLVQQAIHRISDMNLQIASAAEEQSLVAEEINNNTVNIKDLSIKLSEAASNAG 604

Query: 602 MAMEVQTENVREQGKLLNTF 621
             M  Q   V+EQ +LLN F
Sbjct: 605 TEMNAQVSKVKEQNELLNEF 624