Pairwise Alignments

Query, 623 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 544 a.a., Methyl-accepting chemotaxis transducer from Pseudomonas putida KT2440

 Score =  223 bits (569), Expect = 1e-62
 Identities = 143/375 (38%), Positives = 208/375 (55%), Gaps = 2/375 (0%)

Query: 250 WYIGA-VVDESIAFAMVDDLRHSSLIYTVIGVLLSIIGLSFLIKVLMKPLGALSRAIEDV 308
           W IG+ V  + +       LR +SL+   I +L++++ +  + + + +PL    +A+ ++
Sbjct: 171 WIIGSGVYVDDVQAEFARQLRDASLVGVGIALLMALV-VMLIARSIARPLQEAVQAMGNI 229

Query: 309 ASGQGDLTKRLDTNTDMEFAILAKDFNVFCETLQKRIQHLKGIGAEIMHGTEQTVLGAHE 368
           ASG+ DLT+RLDT+   E   L + FN F   LQ  +  L+G    +          A  
Sbjct: 230 ASGESDLTRRLDTHGSDEITHLGEHFNRFNGKLQGVVGQLQGAAHALAQSAGHVGDNAGA 289

Query: 369 SASAMAQQLQELEQLATAMHEMAVTATEVANNAQGAAAAAHEADEASQDGSKVVSDTTRS 428
           +    AQQ  +++Q+ATA++E+     +VA  A+ AA     A +    G + +  +   
Sbjct: 290 AQQRSAQQSLQMDQVATAVNEVTYAVQDVAKTAEQAAGEMRTAQQQVTHGQQAIHGSLAQ 349

Query: 429 IDALSARIEQAVEEVKGLEVATGNIETILKVINDIADQTNLLALNAAIEAARAGESGRGF 488
           ID LS  I++AV+ ++ L   +  I  +L VI  IA+QTNLLALNAAIEAARAGE GRGF
Sbjct: 350 IDRLSLTIDEAVQVIRDLAGHSTRIGGVLDVIRSIAEQTNLLALNAAIEAARAGEQGRGF 409

Query: 489 AVVADEVRTLAQRTQQSTTEIRNMIEQLQSGASAVSAAMNESKYTADDAVQKAQLANESL 548
           AVVADEVR LAQRT QST EI  MIE LQS + A   A++ S   +   V++A+ A  SL
Sbjct: 410 AVVADEVRLLAQRTAQSTAEIHTMIEHLQSQSDAAVKAIDTSSEASRQTVEQAREAGASL 469

Query: 549 QRIRGAIQRISDMNMQIASAAEEQSLVAEEINTNTVKIKDLSTQVADSAKSASMAMEVQT 608
             I   +  ++ +N  IASA  +QS V EEIN N +    LS Q AD+A+ +S A     
Sbjct: 470 DAINQVLNNLTALNASIASATLQQSHVVEEINRNVLDTAGLSQQTADAARQSSDAGVALG 529

Query: 609 ENVREQGKLLNTFIV 623
               E  +LL  F V
Sbjct: 530 RLSEELEQLLRQFRV 544