Pairwise Alignments

Query, 623 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 492 a.a., Methyl-accepting chemotaxis transducer from Pseudomonas putida KT2440

 Score =  209 bits (533), Expect = 2e-58
 Identities = 137/357 (38%), Positives = 199/357 (55%), Gaps = 3/357 (0%)

Query: 254 AVVDESIAFAMVDDLRHSSLIYTVIGVLLSIIGLS-FLIKVLMKPLGALSRAIEDVASGQ 312
           AV+ +S +   V   R S+    V+ ++L+++G S  LI+ L+  L  L   +  V    
Sbjct: 123 AVLAQSPSLRQVFFDRFSNYAVCVLILMLAMLGASQLLIRFLLSQLNTLKDVMLHVEK-T 181

Query: 313 GDLTKRLDTNTDMEFAILAKDFNVFCETLQKRIQHLKGIGAEIMHGTEQTVLGAHESASA 372
           GDL+ R+   +  E   +A  FN    T  + +  +    A++  G  +      +    
Sbjct: 182 GDLSARVPLASGDEVGQMAGAFNAMQSTYHRVVSTVAHSAAQLDSGAARLAASMSDVRHG 241

Query: 373 MAQQLQELEQLATAMHEMAVTATEVANNAQGAAAAAHEADEASQDGSKVVSDTTRSIDAL 432
           M  Q  E +Q ATA++EM+ T   +A +A      +  AD  +  G  VVS    SI  L
Sbjct: 242 MLGQQSETDQAATAINEMSATVHHIAQHAGATRDLSQTADTLAGSGQAVVSRVQDSISGL 301

Query: 433 SARIEQAVEEVKGLEVATGNIETILKVINDIADQTNLLALNAAIEAARAGESGRGFAVVA 492
           S+ ++Q  E ++ L   +  I  ++ VI+ IA+QTNLLALNAAIEAARAG+ GRGFAVVA
Sbjct: 302 SSGVQQTAEMIRQLAEDSQKINGVVSVIHSIAEQTNLLALNAAIEAARAGDLGRGFAVVA 361

Query: 493 DEVRTLAQRTQQSTTEIRNMIEQLQSGASAVSAAMNESKYTADDAVQKAQLANESLQRIR 552
           DEVR LA+R Q ST EI  M+  LQSG       M ES Y ADD V++AQ A E+L  I 
Sbjct: 362 DEVRNLAKRVQTSTDEITTMVSALQSGTRDAVEFMQESSYKADDCVRQAQEAGEALAEIT 421

Query: 553 GAIQRISDMNMQIASAAEEQSLVAEEINTNTVKIKDLSTQ-VADSAKSASMAMEVQT 608
           GA+ ++ + N QIA AAE+QS VAEE+N   V I+D++ + V  +  SA+ + E+ T
Sbjct: 422 GAVAQMRESNTQIAVAAEQQSQVAEEMNRAVVSIRDVTERTVQQTVGSATTSSELAT 478