Pairwise Alignments

Query, 623 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 624 a.a., Methyl-accepting chemotaxis protein PctA from Pseudomonas putida KT2440

 Score =  342 bits (876), Expect = 4e-98
 Identities = 214/612 (34%), Positives = 338/612 (55%), Gaps = 21/612 (3%)

Query: 1   MRFSQKIVAASSALLLCVIALLS----FQQLSTVREEIESLVQDSLMEMVKGVKNTIESD 56
           +RFS KI+ A+S +++   +L +    + Q + +RE++E+ + +        ++N  E  
Sbjct: 5   LRFSHKILLAASLIVILAFSLFTLYNDYLQRNAIREDLENYLAEMGASTSTNIRNLFEGR 64

Query: 57  LASKKGLAQSTTEILQLDPTNKAFAKSVLESPNLKGSFLAIGLGYESDATVVENDDGWEP 116
           +   + LAQ+  +    DP N   A++++    L  SFL + LG + D       D   P
Sbjct: 65  IKLVENLAQNIAQ----DPAN---AETLMGQNALISSFLTVYLG-KVDGGFSVRPDAKMP 116

Query: 117 NADYDPRKRPWYVDAKRERKLVVTEPYVDISTKKIIISIGTPVYQQSNFVGAMFYDVELT 176
           +  YDPR RPWY D        +TEPY+D++T K++I I + V   S+ VG +  D+ L 
Sbjct: 117 DG-YDPRTRPWYKDGMNASGATLTEPYIDMTTNKMVIGILSKV---SSSVGVVGGDLALD 172

Query: 177 QLAQLVNSVNLFDAGYLFITTKDGVTIAHPNAENNGEKFSQFLPN--VDLKEGTQRIELD 234
            L Q++NS+N    GY F+    G  + HP+ +   +  S   P     L      ++ D
Sbjct: 173 GLVQIINSLNFGGMGYAFLVNDQGKILVHPDKDLVMKSLSDLFPQHTPKLTGELTEVQSD 232

Query: 235 GKYYLVKFAQV---PSESWYIGAVVDESIAFAMVDDLRHSSLIYTVIGVLLSIIGLSFLI 291
           G+  L+ F+ +   PS +WYIG  VD+  AF+M+   R S++I TV+ V++ I  L  LI
Sbjct: 233 GQTRLLTFSPITGLPSANWYIGLSVDKDKAFSMLSTFRTSAVIATVVAVVIIIGLLGLLI 292

Query: 292 KVLMKPLGALSRAIEDVASGQGDLTKRLDTNTDMEFAILAKDFNVFCETLQKRIQHLKGI 351
           +VLM+PL  ++RA+ED+A G+GDLTKRL  ++  EF +L   FN F E +   I+ +   
Sbjct: 293 RVLMQPLHTMTRAMEDIAEGEGDLTKRLHIHSHDEFGVLGNAFNRFVERIHSSIREVSSA 352

Query: 352 GAEIMHGTEQTVLGAHESASAMAQQLQELEQLATAMHEMAVTATEVANNAQGAAAAAHEA 411
             ++     + +  ++ S +   +Q      +A A++E+   A E+A NA  A+  A  A
Sbjct: 353 TEQVNEVALRVISASNSSMTNSDEQSNRTNSVAAAINELGAAAQEIAGNAAQASQHASSA 412

Query: 412 DEASQDGSKVVSDTTRSIDALSARIEQAVEEVKGLEVATGNIETILKVINDIADQTNLLA 471
              +++G +VV     +++ LS  I  +   ++ L   T NI  IL+VI  I+ QTNLLA
Sbjct: 413 RLLAEEGQQVVERNIAAMNRLSDLIVTSSAHIETLNSKTVNIGQILEVITSISQQTNLLA 472

Query: 472 LNAAIEAARAGESGRGFAVVADEVRTLAQRTQQSTTEIRNMIEQLQSGASAVSAAMNESK 531
           LNAAIEAARAGE+GRGFAVVADEVR LA RTQ+S  +++ MIE+LQ GA      M +S+
Sbjct: 473 LNAAIEAARAGEAGRGFAVVADEVRNLAHRTQESAQQVQTMIEELQVGARESVDTMEQSQ 532

Query: 532 YTADDAVQKAQLANESLQRIRGAIQRISDMNMQIASAAEEQSLVAEEINTNTVKIKDLST 591
             + D++Q A  A E L  +   I  I  MN  +A+A EEQ+ V E IN +  +I  L+ 
Sbjct: 533 RHSQDSMQIANQAGERLDSVTVRIGEIDGMNQSVATATEEQTAVVEAINMDINEINMLNQ 592

Query: 592 QVADSAKSASMA 603
           +  ++ ++   A
Sbjct: 593 EGVENLQATLRA 604