Pairwise Alignments

Query, 623 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 688 a.a., Methyl-accepting chemotaxis transducer from Pseudomonas putida KT2440

 Score =  288 bits (738), Expect = 4e-82
 Identities = 198/520 (38%), Positives = 294/520 (56%), Gaps = 34/520 (6%)

Query: 124 KRPWYVDAKRERKLVVTEPYVD-ISTKKIII-SIGTPVYQQSNFVGAMFYDVELTQLAQL 181
           K  W    +   +  + EPY+D ++ +++++ SI  P+ +    VG +  D+ L  L QL
Sbjct: 183 KNRWLTCPQDTARTCMLEPYLDEVNGRQVLMTSIALPLLEHGKVVGVVGLDIGLANLQQL 242

Query: 182 VNSVN----LFDA-GYLFITTKDGVTIAHPNAENNGEKFSQFLPNVDLKEGTQRIELDGK 236
             SVN    LFD  G + I T  G+   +   ++             L +   +   DG 
Sbjct: 243 --SVNGRRDLFDGQGQVSIATAAGLLAGNSRDDSV------------LGKPMDKSVADGL 288

Query: 237 YYLVK-FAQVPSES-WYIGAVVDESIAFAMVDDL--------RHSSLIYTVIGVLLSIIG 286
             +   F  +P  + W +   + ES+  A    L        ++++L   +IG+  +I G
Sbjct: 289 LRVAHPFTPIPDTAPWQVVLELPESVLQAPAVALNQRLDAHNQNANLTSLLIGLGTAIAG 348

Query: 287 LSFL---IKVLMKPLGALSRAIEDVASGQGDLTKRLDTNTDMEFAILAKDFNVFCETLQK 343
           L  +    + + +P+ A++  +ED+ASG+GDLT+RLD     E   L   FN F + LQ 
Sbjct: 349 LLLVWLTARGVTRPILAVAARLEDIASGEGDLTRRLDYAHQDELGQLTGWFNRFLDKLQP 408

Query: 344 RIQHLKGIGAEIMHGTEQTVLGAHESASAMAQQLQELEQLATAMHEMAVTATEVANNAQG 403
            I  +KG   E  +  +Q+   A +++  M QQ +E+EQ+ATA +EM+ TA +VA+NA  
Sbjct: 409 VIAQVKGSLQEARNTADQSAAIASQTSDGMQQQHREIEQVATAANEMSATALDVAHNASQ 468

Query: 404 AAAAAHEADEASQDGSKVVSDTTRSIDALSARIEQAVEEVKGLEVATGNIETILKVINDI 463
           AA AA  AD+ASQ+G ++V  T + ID L+A +  A++E + LE  +G I ++L+VI  I
Sbjct: 469 AAQAARAADQASQEGLQLVDSTRQGIDRLAAGMNTAMDEARALEDRSGQIGSVLEVIRTI 528

Query: 464 ADQTNLLALNAAIEAARAGESGRGFAVVADEVRTLAQRTQQSTTEIRNMIEQLQSGASAV 523
           A+QTNLLALNAAIEAARAGE+GRGFAVVADEVR LAQRTQ S  EIR +IE LQ G   V
Sbjct: 529 AEQTNLLALNAAIEAARAGEAGRGFAVVADEVRGLAQRTQVSVEEIRQVIEGLQQGTQDV 588

Query: 524 SAAMNESKYTADDAVQKAQLANESLQRIRGAIQRISDMNMQIASAAEEQSLVAEEINTNT 583
             AM+  +  A D+  + + A  +LQRI  A+  ISDMN+QIASAAEEQS VAEE+N N 
Sbjct: 589 VGAMHAGQRQAQDSAARMEQALPALQRIGEAVAVISDMNLQIASAAEEQSAVAEEVNRNV 648

Query: 584 VKIKDLSTQVADSAKSASMAMEVQTENVREQGKLLNTFIV 623
             I+D++  +A  A  ++   +       +Q  L+  F V
Sbjct: 649 AGIRDVTESLAGQADESARISQALNRLANQQQALMEQFRV 688