Pairwise Alignments

Query, 623 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 645 a.a., Methyl-accepting chemotaxis transducer from Pseudomonas putida KT2440

 Score =  261 bits (668), Expect = 5e-74
 Identities = 182/611 (29%), Positives = 302/611 (49%), Gaps = 26/611 (4%)

Query: 5   QKIVAASSALLLCVIALLSFQQLSTVREEIESLVQDSLMEMVKGVKNTIESDLASKKGLA 64
           Q I +  +ALL  ++ ++    ++  R     LV  +L   ++ ++N IE  L      A
Sbjct: 11  QLITSMGAALLASILVVVIIFTVALNRLTDRYLVDTALPASIEAIRNDIERMLGQPLVAA 70

Query: 65  QSTTEILQL--------DPTN-KAFAKSVLESPNLKGSFLAIGLGYESDATVVENDDGWE 115
                   L        DP     F + +  +     +F  +    E+      N++G +
Sbjct: 71  ADIAGNTLLRDWLAAGEDPAQAPQFIEYLTAAKQRNHAFTTLFASTETGH--YYNENGLD 128

Query: 116 PNADYDPRKRPW---YVDAKRERKLVVTEPYVDISTKKIIISIGTPVYQQSNFVGAMFYD 172
                   K  W   Y+D+  ER + +    +D +T ++ + I   V ++   VG     
Sbjct: 129 RTLSRSNPKDKWFYGYIDSGAERFINID---IDGATGELALFIDYRVEKEGKLVGVAGMG 185

Query: 173 VELTQLAQLVNSVNLFDAGYLFITTKDGVTIAHPNAENNGEKFSQFLPNVDLKEG----- 227
           + +T+L++L++  +  + G +F+   DG+   HP+A  +G++        D  +G     
Sbjct: 186 LRMTELSKLIHDFSFGEHGKVFLVRNDGLIQVHPDAAFSGKRQLAEQLGADAAKGVMTGG 245

Query: 228 ----TQRIELDGKYYLVKFAQVPSESWYIGAVVDESIAFAMVDDLRHSSLIYTVIGVLLS 283
               + R   DG+ YL     +   +W + A V ES  +A +      + +      L+S
Sbjct: 246 ESLRSSRFSRDGERYLALGLPLRDLNWTLVAEVPESEIYAQMHQAVWLTSLIGGAVALVS 305

Query: 284 IIGLSFLIKVLMKPLGALSRAIEDVASGQGDLTKRLDTNTDMEFAILAKDFNVFCETLQK 343
           ++ +  L + L++P+  ++ A+  + SG GDL+ RLD +   E   LA+ FN F ++ + 
Sbjct: 306 LLLVVLLARGLVRPIRRVTAALVQIGSGAGDLSHRLDDSRQDELGDLARGFNRFLDSQRS 365

Query: 344 RIQHLKGIGAEIMHGTEQTVLGAHESASAMAQQLQELEQLATAMHEMAVTATEVANNAQG 403
            I  +      +    EQ       +A    +Q +  E +ATA+HEM +T  ++A NA  
Sbjct: 366 LIGEVLSTSERLRRAVEQVTQVVDNTAERSGRQQEMTEMVATAVHEMGLTVQDIARNAGD 425

Query: 404 AAAAAHEADEASQDGSKVVSDTTRSIDALSARIEQAVEEVKGLEVATGNIETILKVINDI 463
           AA A+  A + +    +VV  + R I+ +S  I +A + V  L     +++ +L VI  I
Sbjct: 426 AAQASQSARDEALQAREVVQRSIRGIEGMSGDIGKAADAVSQLADEVASVDEVLAVIRSI 485

Query: 464 ADQTNLLALNAAIEAARAGESGRGFAVVADEVRTLAQRTQQSTTEIRNMIEQLQSGASAV 523
           ++QTNLLALNAAIEAARAGE GRGFAVVADEVRTLA+RTQ ST E++ MI++L+ GA + 
Sbjct: 486 SEQTNLLALNAAIEAARAGEMGRGFAVVADEVRTLARRTQLSTDEVQQMIQRLKLGAGSA 545

Query: 524 SAAMNESKYTADDAVQKAQLANESLQRIRGAIQRISDMNMQIASAAEEQSLVAEEINTNT 583
            ++M   +      V+ +Q    SL  I   ++ ISDMN Q+A+A EEQS V EEIN   
Sbjct: 546 VSSMQAGQQATGSGVESSQRTGASLSAITDQVEHISDMNHQVATATEEQSAVTEEINRTV 605

Query: 584 VKIKDLSTQVA 594
             I DL+ + A
Sbjct: 606 QGISDLARETA 616