Pairwise Alignments

Query, 623 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 629 a.a., Methyl-accepting chemotaxis protein PctA from Pseudomonas lactucae CFBP13502

 Score =  354 bits (909), Expect = e-102
 Identities = 214/608 (35%), Positives = 332/608 (54%), Gaps = 8/608 (1%)

Query: 1   MRFSQKIVAASSALLLCVIALLSFQQLSTVREEIESLVQDSLMEMVKGVKNTIESDLASK 60
           +RFS KI+ A+S +++   +L +       R  I   +   L EM     N+I++ L+ +
Sbjct: 5   LRFSHKILLAASLIVIVAFSLFTLYNDYLQRNAIRDDLNSYLHEMSDVTANSIQTWLSGR 64

Query: 61  KGLAQSTTEILQLDPTNKAFAKSVLESPNLKGSFLAIGLGYESDATVVENDDGWEPNADY 120
             L ++  + + ++P   A   S+L+   L  SF+A  +G    A  +  D        +
Sbjct: 65  IALVENAAQNIAINP-EPAVVASLLDQKTLTSSFMATYVGDSKGAFTIRPDTKMPDG--F 121

Query: 121 DPRKRPWYVDAKRERKLVVTEPYVDISTKKIIISIGTPVYQQSNFVGAMFYDVELTQLAQ 180
           DPR RPWY  A+      +TEPY+D +T K+IISI TP  + S  VG +  D+ L  L  
Sbjct: 122 DPRVRPWYKGAQASNGSTLTEPYIDAATGKLIISIATPSTRASEAVGVVGGDLSLQTLVD 181

Query: 181 LVNSVNLFDAGYLFITTKDGVTIAHPNAENNGEKFSQFLPNVDLKEGTQ--RIELDGKYY 238
            + ++     GY F+ + DG  + HP+     +  +   P    K  +    ++ +GK  
Sbjct: 182 NIGALKFGGMGYAFLVSADGKVLVHPDKNLVMKTLADVYPKNTPKISSDFSEVQANGKDN 241

Query: 239 LVKFAQV---PSESWYIGAVVDESIAFAMVDDLRHSSLIYTVIGVLLSIIGLSFLIKVLM 295
           +V F Q+   PS +WY+G  VD+  A+AM+   R S++I TVI V++ I  L  LI+VL+
Sbjct: 242 IVTFTQIKGLPSVNWYLGVSVDKDEAYAMLSKFRTSAVIATVIAVVIIIALLGMLIRVLL 301

Query: 296 KPLGALSRAIEDVASGQGDLTKRLDTNTDMEFAILAKDFNVFCETLQKRIQHLKGIGAEI 355
           +PL  ++RA++D+A G+GDLT+RL      EF  L   FN F E +   I+ +     ++
Sbjct: 302 QPLHLMTRAMQDIADGEGDLTRRLAIQNHDEFGTLGDAFNSFVERIHTSIREVSSATEQV 361

Query: 356 MHGTEQTVLGAHESASAMAQQLQELEQLATAMHEMAVTATEVANNAQGAAAAAHEADEAS 415
                + V  ++ S     +Q      +A A++E+   A E+A NA  A+  A +A + +
Sbjct: 362 NEVALRVVSASNSSMVNSDEQANRTNSVAAAINELGAAAQEIARNAAQASNQASDARQLA 421

Query: 416 QDGSKVVSDTTRSIDALSARIEQAVEEVKGLEVATGNIETILKVINDIADQTNLLALNAA 475
           +DG +VV    +++  LSA I  +   ++ L   T NI  IL+VI  I+ QTNLLALNAA
Sbjct: 422 EDGQQVVERNIKAMTQLSAMISASSSNIEALNSKTVNIGQILEVITSISQQTNLLALNAA 481

Query: 476 IEAARAGESGRGFAVVADEVRTLAQRTQQSTTEIRNMIEQLQSGASAVSAAMNESKYTAD 535
           IEAARAGE+GRGFAVVADEVR LA RTQ+S  +++ MIE+LQ GA    + M ES+  + 
Sbjct: 482 IEAARAGEAGRGFAVVADEVRNLAHRTQESAQQVQTMIEELQVGARDSVSTMGESQRHSH 541

Query: 536 DAVQKAQLANESLQRIRGAIQRISDMNMQIASAAEEQSLVAEEINTNTVKIKDLSTQVAD 595
           D+V+ A LA E L  +   I  I  MN  +A+A EEQ+ V E IN +  +I  L+ +  +
Sbjct: 542 DSVEIANLAGERLNSVTQRIGEIDGMNQSVATATEEQTSVVESINMDITEINTLNQEGVE 601

Query: 596 SAKSASMA 603
           + +S   A
Sbjct: 602 NLQSTLRA 609