Pairwise Alignments

Query, 339 a.a., outer membrane protein assembly factor BamC from Vibrio cholerae E7946 ATCC 55056

Subject, 346 a.a., outer membrane protein assembly factor BamC from Dickeya dianthicola ME23

 Score =  185 bits (470), Expect = 1e-51
 Identities = 102/334 (30%), Positives = 170/334 (50%), Gaps = 4/334 (1%)

Query: 8   VLGSLAVLVLSACSSSPTQRRQAKDDFDYLETTEFKPWVLPQGAT-PQFYPNYDIPQGAF 66
           V+G   +++L+AC+S    +RQ   D  YL+T E +   +P G   P    +Y++P    
Sbjct: 13  VVGVSLIMLLAACTSDQRYKRQVNGDESYLKTPEHRALNVPSGLILPVQNGDYEVPPVNQ 72

Query: 67  HGGVGNVVDIRPPQQVLELIPGARAERQNGEVTLWMLRQDEAQKVWDTALKMIAER--KI 124
           +G +G  +DIRPP Q L L+ G+R +      TL +        +W    +++  +   I
Sbjct: 73  NGLIGKALDIRPPMQPLALLNGSRGQVSGNTATLLLENNARNSSLWAVLTQVLQSKGYTI 132

Query: 125 PLRKQTDSMVETDWVDWVSEDEDVTIGSRYLMSMVETNNRYGFKISLIGWRENGQVQTVS 184
             R+     + TDWV+W  EDEDV   +RY +S+     +    + L+  ++N    T  
Sbjct: 133 ASRQDASRTLTTDWVNWKREDEDVAHQARYQISLQTQGYQLALTVKLLDLQQNTSPVT-E 191

Query: 185 TTNKERYNAFMTNLVTTRYDSDVRAEAARRAQELVKQIPITMGSDRSGFPVIIARTPYDV 244
            +  +RY A M N ++   D  +    + +A    +Q+ +  G+D SG P+++ R  Y+ 
Sbjct: 192 RSEIQRYTALMLNTLSDELDKRLNDNDSAQANRNSQQLNVQSGADDSGLPLLVVRGSYNQ 251

Query: 245 LWQRLPELLPKMGFTIEERNQSQGTVKAKYAAPDDEFWQQVGVKPIELKSGTYTFLFGDL 304
           +W RLP+ L K+G TI +R++ QG V   Y AP    W ++G    EL +G Y    GDL
Sbjct: 252 VWDRLPKALEKVGMTISDRSRPQGAVSVSYKAPGSSAWNELGTHDPELPNGDYKLQVGDL 311

Query: 305 GNRTSINVTDSAGKPVNEALLKEMVPVLSAVVDK 338
           GNR+++   DS G  ++++    +V VL A   K
Sbjct: 312 GNRSTLQFIDSKGHTLSQSQNDALVAVLQAAFSK 345