Pairwise Alignments

Query, 377 a.a., succinyl-diaminopimelate desuccinylase from Vibrio cholerae E7946 ATCC 55056

Subject, 434 a.a., N-formyl-4-amino-5-aminomethyl-2-methylpyrimidine deformylase from Xanthobacter sp. DMC5

 Score = 68.9 bits (167), Expect = 2e-16
 Identities = 90/394 (22%), Positives = 148/394 (37%), Gaps = 56/394 (14%)

Query: 23  DAGCQDLMIERLKALGFEIESM--------VFEDTTNFWARRGTQSPLFVFAGHTDVVPA 74
           + G   L+ ++L ALGF ++          V  D         ++ P  +   H D  PA
Sbjct: 55  EEGIALLLADKLTALGFTVDLKARTPHRLNVIADLPG-----ASEGPSLILNDHLDTYPA 109

Query: 75  GPLSQWHTP---PFEPTVIDGFLHGRGAADMKGSLACMIVAVERFIAEHPDHQGSIGFLI 131
           G  + W      PF PT     L+ RG +D +G+LAC ++AVE   A     +G++  + 
Sbjct: 110 GDWAAWTMTGGHPFRPTRHGDLLYARGTSDTRGNLACTLLAVEAIRAAGVRLKGTLKCVY 169

Query: 132 TSDEEGPFINGTVRVVETLMARNELIDMCIVGEPSSTLAV----GDVVKNGRRGSITGDL 187
           T+DEE    +G++ +++         D  IV EP++  A     G  +     G+   ++
Sbjct: 170 TADEEKNGPDGSIFLLDEC---GLAADYTIVCEPTAWTAPDGGWGMGIAIANCGNFLVEV 226

Query: 188 KVKGTQGHVAYPHLANNPVHKALPALAELAATQWDEGNAYF----PP------------- 230
           +  G + H+  P    N + K +  L +L    +    A      PP             
Sbjct: 227 ETSGIKTHLWRPDTGINAITKMMELLPQLEKMSFAHTTAPHAGGTPPMVTVLRIAGGVPR 286

Query: 231 -TSFQIPNLQAGTGASNVIPGEFDVQFNFRFSTELTDEEIKRRVHSVLDAHGLDYDVKWT 289
              F   + +A  G   ++PG          + +    +I R +   L A          
Sbjct: 287 EMQFTPDSCKAVLGVVGILPG---------MTRDSVMADINRVIAGALAADPTLKAEARP 337

Query: 290 LSGQPFLTDTGELLA------AVVAAVEEVNHQAPALLTTGGTSDGRFIAQMGAQVVELG 343
             G  F+  TGE  A      ++  A  EV    P L      +D    ++ G + V  G
Sbjct: 338 FPGALFVDGTGEQEADAEPVRSLRKAYGEVLSGEPKLYRKNAFNDTIRFSERGFKAVTFG 397

Query: 344 PVNATIHKVNECVRIADLEKLTDMYQKTLNHLLG 377
           P       VNE + I      T +   T+  LLG
Sbjct: 398 PGEDGWAPVNESIHIGKAVAATRILALTVMELLG 431