Pairwise Alignments

Query, 377 a.a., succinyl-diaminopimelate desuccinylase from Vibrio cholerae E7946 ATCC 55056

Subject, 390 a.a., Acetylornithine deacetylase from Xanthobacter sp. DMC5

 Score = 85.5 bits (210), Expect = 2e-21
 Identities = 102/321 (31%), Positives = 135/321 (42%), Gaps = 43/321 (13%)

Query: 59  QSPLFVFAGHTDVVPAGPLSQWHTPPFEPTVIDGFLHGRGAADMKGSLACMIVAVERFIA 118
           + P  V + HTDVV A     W + PF  T     L+GRG +DMKG +AC++ A+  F A
Sbjct: 61  ERPGVVLSAHTDVV-AVEGQPWTSDPFALTARGDRLYGRGTSDMKGFVACVLAALPAFAA 119

Query: 119 ---EHPDHQGSIGFLITSDEEGPFINGTVRVVETLMARNELIDMCIVGEPSSTLAVGDVV 175
              E P H      +  S +E     G   +V  L A      +CIVGEP+     G  V
Sbjct: 120 AALETPVH------VALSYDEEIGCKGAGDLVALLAALPMPPLLCIVGEPT-----GMKV 168

Query: 176 KNGRRGSITGDLKVKGTQGHVAYPHLANNPVHKALPALAELAATQWD---------EGNA 226
           K   +G     +   G  GH A PH A N    A+ ALA LAA   D            A
Sbjct: 169 KRAHKGKTGWRVTATGRTGHSALPHRAAN----AVTALARLAARLADLADDLRGGARDEA 224

Query: 227 YFPP-TSFQIPNLQAGTGASNVIPGEFDVQFNFRFSTELTDEEIKRRV-------HSVLD 278
           + PP  +  I +L  G GA NV+P    ++F  R         I RR+        + L 
Sbjct: 225 FDPPYATLHIGSLHGG-GALNVVPDRAVMEFELRSIPGADTPTILRRIEVLVAEARAALK 283

Query: 279 AHGLDYD-VKWTLSGQPFL-TDTGELLAAVVAAVEEVNHQAPALLTTGGTSDGRFIAQMG 336
           A   + D V   LS  P L T  G   AA VA +       P      GT  G + ++ G
Sbjct: 284 AEAEEADLVVEELSSYPALATAAGSAEAAAVARL--CGDNGPPGTIAFGTEAGLY-SEAG 340

Query: 337 AQVVELGPVN-ATIHKVNECV 356
              +  GP + A  HK +E V
Sbjct: 341 IPTLVCGPGDIARAHKADEWV 361