Pairwise Alignments

Query, 377 a.a., succinyl-diaminopimelate desuccinylase from Vibrio cholerae E7946 ATCC 55056

Subject, 382 a.a., acetylornithine deacetylase from Pseudomonas simiae WCS417

 Score = 70.5 bits (171), Expect = 7e-17
 Identities = 87/359 (24%), Positives = 148/359 (41%), Gaps = 29/359 (8%)

Query: 28  DLMIERLKALGFEIE-SMVFEDTTNFWARRGTQSPLFVFAGHTDVVPAGPLSQWHTPPFE 86
           DL+   L  LGF I+   V     N  A  G+     V AGH+D VP    + W T P +
Sbjct: 35  DLLASWLGDLGFAIDIQQVSPGKFNLLASFGSGPGGLVLAGHSDTVPYDA-ALWKTDPLK 93

Query: 87  PTVIDGFLHGRGAADMKGSLACMIVAVERFIAEHPDHQGSIGFLITSDEEGPFINGTVRV 146
            T +DG   G G+ DMKG  A  I AV   + +    +  +  L T DEE   ++G   +
Sbjct: 94  LTEVDGRWVGLGSCDMKGFFALAIEAVLPLLDQ--TFKQPLLILATCDEESS-MSGARAL 150

Query: 147 VETLMARNELIDMCIVGEPSSTLAVGDVVKNGRRGSITGDLKVKGTQGHVAYPHLANNPV 206
            E   A   L    ++GEP+    +        +G +   + + G  GH + P L ++ +
Sbjct: 151 AE---AGRPLGRAAVIGEPTGLKPI-----RLHKGVMMERIDILGQSGHSSDPSLGHSAL 202

Query: 207 HKALPALAELAATQWDEGNAYFPPTSFQIPNLQAGTGA------SNVIPGEFDVQFNFR- 259
                A+ EL   +      Y  P  F +P      G        N I G+  ++F+ R 
Sbjct: 203 EAMHDAIGELRGLRLGWQREYRNP-QFSVPQPTMNFGCIHGGDNPNRICGQCSLEFDLRP 261

Query: 260 ---FSTELTDEEIKRRVHSVLDAHGLDYDVKWTLSGQPFLTDTGELLAAVVAAVEEVNHQ 316
                 E+    I++++  + + H +  D        P   +  E    V  A     H+
Sbjct: 262 LPGMDPEVLRAAIRQKLEPLAERHQVKIDYAPLFPAVPPF-EQPEDTELVRVAERLTGHR 320

Query: 317 APALLTTGGTSDGRFIAQMGAQVVELGPVN-ATIHKVNECVRIADLEKLTDMYQKTLNH 374
           A A+    GT +  ++ ++G + + LGP + A  H+  E + ++ L     + ++ + H
Sbjct: 321 AEAV--AFGT-EAPYLQRLGCETLVLGPGDIACAHQPGEYLEMSRLTPTVRLLRELIEH 376