Pairwise Alignments

Query, 377 a.a., succinyl-diaminopimelate desuccinylase from Vibrio cholerae E7946 ATCC 55056

Subject, 385 a.a., acetylornithine deacetylase from Pseudomonas simiae WCS417

 Score = 70.9 bits (172), Expect = 6e-17
 Identities = 86/335 (25%), Positives = 130/335 (38%), Gaps = 42/335 (12%)

Query: 61  PLFVFAGHTDVVPAGPLSQWHTPPFEPTVIDGFLHGRGAADMKGSLACMIVAVERFIAEH 120
           P  V +GHTDVVP     +W   PF+ T  DG L+GRG ADMKG +AC++  V   +   
Sbjct: 62  PGIVLSGHTDVVPVEG-QRWSVAPFDLTEKDGKLYGRGTADMKGYIACVLACVPALV--K 118

Query: 121 PDHQGSIGFLITSDEEGPFINGTVRVVETLMARNELIDMCIVGEPSSTLAVGDVVKNGRR 180
              +  +   ++ DEE   + G   ++E    +     +C++GEP+    V      G +
Sbjct: 119 ASLRMPVHIALSYDEEVGCL-GVRSLIERFHEQPVKPLLCVIGEPTELKPV-----LGHK 172

Query: 181 GSITGDLKVKGTQGHVAYPHLANNPVHKALPALAEL--------AATQWDEGNAYFPPTS 232
           G +     V G   H AY     N +  A   ++EL        A    D+   + P  S
Sbjct: 173 GKLAMRCHVHGAACHSAYAPAGVNAIEYAACLISELVRLGETLKAPQHLDQ--RFAPAFS 230

Query: 233 FQIPNLQAGTGASNVIPGEFDVQFNFRFSTELTDEEIKRR------------VHSVLDAH 280
                L  G  A N++P +    F  R        ++ R+            + +V +  
Sbjct: 231 TVQTGLINGGKALNIVPQDCSFDFEVRSLPAQDPWQVARQLQAYAEQTLLPAMRAVSEQS 290

Query: 281 GLDYDVKWTLSGQPFLTDTGELLAA--VVAAVEEVNHQAPALLTTGGTSDGRFIAQMGAQ 338
            +       LS  P L  + E  AA  V            A  T GG  D     Q G  
Sbjct: 291 AISLS---ELSSYPGLATSLESQAAEWVAQFCGSREFATVAFGTEGGLFD-----QAGIP 342

Query: 339 VVELGPVNATI-HKVNECVRIADLEKLTDMYQKTL 372
            V  GP +    HK +E + +A L+    M  + L
Sbjct: 343 TVVCGPGSMEQGHKPDEFISVAQLQACDRMLARVL 377