Pairwise Alignments

Query, 377 a.a., succinyl-diaminopimelate desuccinylase from Vibrio cholerae E7946 ATCC 55056

Subject, 384 a.a., Uncharacterized deacetylase PA5390 from Variovorax sp. SCN45

 Score = 74.7 bits (182), Expect = 4e-18
 Identities = 88/307 (28%), Positives = 130/307 (42%), Gaps = 28/307 (9%)

Query: 64  VFAGHTDVVPAGPLSQWHTPPFEPTVIDGFLHGRGAADMKGSLACMIVAV---ERFIAEH 120
           V +GH+DVVP      W   PF     DG  HGRGAADMKG +A  + AV   ++     
Sbjct: 65  VLSGHSDVVPVTD-QNWSANPFTLVERDGRFHGRGAADMKGFIAACLSAVPSWQQRALSR 123

Query: 121 PDHQGSIGFLITSDEEGPFINGTVRVVETLMARNELIDMCIVGEPSSTLAVGDVVKNGRR 180
           P H      L  S +E     G  R+V  L  + E   + I+GEP+  + +G  V++  R
Sbjct: 124 PIH------LAFSYDEEIGCLGVPRLVNRLKTQVEAPALAIIGEPTE-MRIG--VRH--R 172

Query: 181 GSITGDLKVKGTQGHVAYPHLANNPVHKA---LPALAELAATQWDEGNAYFPPTSFQIPN 237
           G         G   H + P L  + +  A   +  LA L  +    G       +  I  
Sbjct: 173 GFFGHRALFSGLPAHSSDPSLGASAIEPAAYLVTCLAGLRRSLASRGGG----ATLNIGR 228

Query: 238 LQAGTGASNVIPGEFDVQFNFRFSTELTDEEIKRRVHSVLDAHGLDYDVK-WTLSGQPFL 296
           +  GT A N++PG  +V + FR   E   E ++  V   L        V+ + ++G P L
Sbjct: 229 IDGGT-AINIVPGCCEVLWEFRPQDETAAELVRDAVRGALADLPTGVTVEAFQVAGVPAL 287

Query: 297 TDTGELLAAVVAAVEEVNHQAPALLTTGGTSDGRFIAQMGAQVVELGPVN-ATIHKVNEC 355
           +     +A  VA   E+    P      GT  G F  Q+G   V  GP + A  H+ +E 
Sbjct: 288 SSRNNDMAVSVA--RELGALWPEADLPFGTEAG-FFQQVGIPTVVCGPGSIAQAHQPDEW 344

Query: 356 VRIADLE 362
           +    L+
Sbjct: 345 ICATQLQ 351