Pairwise Alignments

Query, 377 a.a., succinyl-diaminopimelate desuccinylase from Vibrio cholerae E7946 ATCC 55056

Subject, 388 a.a., Uncharacterized deacetylase from Variovorax sp. SCN45

 Score = 64.7 bits (156), Expect = 4e-15
 Identities = 75/288 (26%), Positives = 116/288 (40%), Gaps = 25/288 (8%)

Query: 2   TDSPVLALAKELISRQSVTPADAGCQ--DLMIERLKALGFEIESMVFEDTT--NFWARRG 57
           T SP   L  + + R +   A++  +  D     LKALG +       + T  N +A  G
Sbjct: 4   TLSPQSLLLAQTLVRMNTVSANSNLELIDFAQSHLKALGVQSRITYNAERTKANLFATLG 63

Query: 58  TQSPLFVF-AGHTDVVPAGPLSQWHTPPFEPTVIDGFLHGRGAADMKGSLACMIVAVERF 116
              P  V  +GHTD VP      W   P    V +  L+GRG+ADMK  +A  +    RF
Sbjct: 64  EGKPAGVIVSGHTDTVPWDG-QDWSVDPLSAIVQNERLYGRGSADMKSFIAIALANAGRF 122

Query: 117 IAEHPDHQGSIGFLITSDEE-GPFINGTVRVVETLMARNELIDMCIVGEPSSTLAVGDVV 175
           +    D   ++ F  + DEE G F  G   ++  +         CIVGEP+S      V 
Sbjct: 123 L--ESDSPFAVHFAFSYDEEVGCF--GVKELIADMRDAGINPLACIVGEPTSM-----VP 173

Query: 176 KNGRRGSITGDLKVKGTQGHVAYPHLANNPVHKALPALAELAATQWDEGNAYFPPTSFQI 235
               +G       V+G + H +    + N +  A   + ++     D          F +
Sbjct: 174 AIAHKGVYRYKCCVRGKEAHSSLTPKSVNAIEMAARVIGKVRDMAEDFERNEPRYEGFDV 233

Query: 236 PNLQAGTG------ASNVIPGEFDVQFNFRFSTELTDEEIKRRVHSVL 277
           P   A  G      A NV+P + + ++ FR   +L   + KR    V+
Sbjct: 234 PFSTASVGQFHGGIADNVVPRDAEFRYEFR---DLPTADAKRMQADVM 278