Pairwise Alignments

Query, 377 a.a., succinyl-diaminopimelate desuccinylase from Vibrio cholerae E7946 ATCC 55056

Subject, 380 a.a., acetylornithine deacetylase from Pseudomonas putida KT2440

 Score = 72.0 bits (175), Expect = 3e-17
 Identities = 90/359 (25%), Positives = 145/359 (40%), Gaps = 29/359 (8%)

Query: 28  DLMIERLKALGFEIE-SMVFEDTTNFWARRGTQSPLFVFAGHTDVVPAGPLSQWHTPPFE 86
           DL+   L  LGF+ +   V     N  A RGT     V AGH+D VP      W + P +
Sbjct: 35  DLLAGWLGDLGFKCDIQQVSPGKFNLLASRGTGPGGLVLAGHSDTVPYDE-QLWASDPLK 93

Query: 87  PTVIDGFLHGRGAADMKGSLACMIVAVERFIAEHPDHQGSIGFLITSDEEGPFINGTVRV 146
               DG   G G+ DMKG  A +I AV   + EH D +  +  L T DEE   ++G   +
Sbjct: 94  LIETDGRWVGLGSCDMKGFFALVIEAVIPLL-EH-DFKEPLLILATCDEESS-MSGARAL 150

Query: 147 VETLMARNELIDMCIVGEPSSTLAVGDVVKNGRRGSITGDLKVKGTQGHVAYPHLANNPV 206
            E   A   L    I+GEP+    +        +G +   + + G  GH + P L  + +
Sbjct: 151 AE---AGQPLGRAAILGEPTGLRPI-----RMHKGILMDRIDILGRSGHSSDPSLGRSAM 202

Query: 207 HKALPALAELAATQWDEGNAYFPPTSFQIPNLQAGTGA------SNVIPGEFDVQFNFR- 259
                 + EL   +      Y  P  F +P      G        N I G+  ++F+ R 
Sbjct: 203 EAMHAVMGELMGLRQQWQQTYSNP-QFTVPTPTMNFGCIHGGDNPNRICGQCALEFDLRP 261

Query: 260 ---FSTELTDEEIKRRVHSVLDAHGLDYDVKWTLSGQPFLTDTGELLAAVVAAVEEVNHQ 316
                 +     I+ ++  V + H +  D        P      + +  V  A     H+
Sbjct: 262 LPGMDVDQLRAAIREKLVLVAERHEVRIDYAPLFPEVPPFEQAAD-VELVQVAERLTGHR 320

Query: 317 APALLTTGGTSDGRFIAQMGAQVVELGPVN-ATIHKVNECVRIADLEKLTDMYQKTLNH 374
           A A+    GT +  ++ Q+G Q + LGP + A  H+  E + ++ +E    + +  + H
Sbjct: 321 AEAV--AFGT-EAPYLQQLGCQTIVLGPGDIACAHQPGEYLEMSRIEPTVRLLRDLIRH 376