Pairwise Alignments

Query, 377 a.a., succinyl-diaminopimelate desuccinylase from Vibrio cholerae E7946 ATCC 55056

Subject, 391 a.a., putative Acetylornithine deacetylase from Pseudomonas putida KT2440

 Score = 76.6 bits (187), Expect = 1e-18
 Identities = 85/328 (25%), Positives = 133/328 (40%), Gaps = 28/328 (8%)

Query: 64  VFAGHTDVVPAGPLSQWHTPPFEPTVIDGFLHGRGAADMKGSLACMIVAVERFIAEHPDH 123
           V +GHTDVVP    + W   PF  +  DG L+GRG ADMKG +A ++ AV  F+A+    
Sbjct: 73  VLSGHTDVVPVDGQA-WTVEPFALSERDGRLYGRGTADMKGFIASVLAAVPAFLAQPLRM 131

Query: 124 QGSIGFLITSDEEGPFINGTVRVVETLMARNELIDMCIVGEPSSTLAVGDVVKNGRRGSI 183
              + F  + DEE   + G   ++  L  R     +C++GEP+    V      G +G +
Sbjct: 132 PVHLAF--SYDEEVGCL-GVRSMLAALQQRPCKPRLCLIGEPTELKPV-----LGHKGKL 183

Query: 184 TGDLKVKGTQGHVAYPHLANNPVHKA------LPALAELAATQWDEGNAYFPPTSFQIPN 237
               +V+G   H AY     N +  A      L  + E  A        + PP S     
Sbjct: 184 AMRCQVQGAACHSAYAPYGVNAIEYAAKLIGKLGEIGEALALPVHHDERFDPPFSTVQAG 243

Query: 238 LQAGTGASNVIPGEFDVQFNFRFSTELTDEEIKRRVHSVLDAHGLDYDVKWT-------- 289
           +  G  A N++P E +  F  R       + +  ++ +  +A  L    K          
Sbjct: 244 VIKGGRALNIVPDECEFDFEVRALPGFEAQAVADQLQTYAEAELLPRMRKVNTASAIRLA 303

Query: 290 -LSGQPFLTDTGELLAAVVAAVEEVNHQAPALLTTGGTSDGRFIAQMGAQVVELGPVNAT 348
            LS  P L    +  AA + A+      +    T    ++G    Q G   V  GP +  
Sbjct: 304 PLSAYPGLATPEDSEAARLVALLS---GSDTFGTVAFGTEGGLFDQAGIPTVVCGPGSMD 360

Query: 349 I-HKVNECVRIADLEKLTDMYQKTLNHL 375
             HK +E V +  L     M  + +++L
Sbjct: 361 QGHKPDEFVSVEQLRGCDAMLLRLVDYL 388