Pairwise Alignments

Query, 377 a.a., succinyl-diaminopimelate desuccinylase from Vibrio cholerae E7946 ATCC 55056

Subject, 390 a.a., N-succinyl-L,L-diaminopimelate desuccinylase (EC 3.5.1.18) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  412 bits (1058), Expect = e-119
 Identities = 217/384 (56%), Positives = 267/384 (69%), Gaps = 11/384 (2%)

Query: 1   MTDSPVLALAKELISRQSVTPADAGCQDLMIERLKALGFEIESMVFEDT----TNFWARR 56
           MTD+  L L + LI+  SVTP D GCQ ++  RL  LGF  E++         TN WAR 
Sbjct: 1   MTDT--LRLTEALIACPSVTPRDEGCQAMIGARLARLGFACETIESGPADFRVTNLWARL 58

Query: 57  GT-QSPLFVFAGHTDVVPAGPLSQWHTPPFEPTVIDGFLHGRGAADMKGSLACMIVAVER 115
           G  + P  VFAGHTDVVP GPL+ W + PF P+  DG L GRG ADMK SLA M+VA E 
Sbjct: 59  GQGRRPTLVFAGHTDVVPTGPLTAWTSDPFVPSHRDGKLFGRGTADMKTSLAAMVVACEE 118

Query: 116 FIAEHPDHQGSIGFLITSDEEGPFINGTVRVVETLMARNELIDMCIVGEPSSTLAVGDVV 175
           F+A +P     + FL+TSDEEGP ++GTV V + L  R E +D CIVGEP+S    GD++
Sbjct: 119 FVAANPAPAIDVAFLLTSDEEGPALDGTVVVCDALRQRGERLDWCIVGEPTSVERTGDMI 178

Query: 176 KNGRRGSITGDLKVKGTQGHVAYPHLANNPVHKALPALAELAATQWDEGNAYFPPTSFQI 235
           KNGRRG+++G L VKG QGH+AYPHLA NP+H A PALAEL AT WDEGNA+FPPTS+QI
Sbjct: 179 KNGRRGTMSGKLTVKGIQGHIAYPHLAKNPIHLAAPALAELTATVWDEGNAFFPPTSWQI 238

Query: 236 PNLQAGTGASNVIPGEFDVQFNFRFSTELTDEEIKRRVHSVLDAHGL----DYDVKWTLS 291
            N+  GTGASNVIPG   + FNFRFSTE T E +++RV  +L  HGL    D+D+ WTL 
Sbjct: 239 SNIHGGTGASNVIPGTVVIDFNFRFSTESTPEGLQQRVAELLQRHGLQPGADFDLDWTLG 298

Query: 292 GQPFLTDTGELLAAVVAAVEEVNHQAPALLTTGGTSDGRFIAQMGAQVVELGPVNATIHK 351
           G+PFLT  G L+ AV AAV         L TTGGTSDGRFIAQ+  QV+ELGP NATIHK
Sbjct: 299 GRPFLTQPGTLVDAVRAAVHAEVGIDTTLSTTGGTSDGRFIAQVCPQVIELGPPNATIHK 358

Query: 352 VNECVRIADLEKLTDMYQKTLNHL 375
           ++E V +AD+E L ++Y++TL HL
Sbjct: 359 IDEHVAVADIEPLKNIYRRTLEHL 382