Pairwise Alignments

Query, 377 a.a., succinyl-diaminopimelate desuccinylase from Vibrio cholerae E7946 ATCC 55056

Subject, 382 a.a., acetylornithine deacetylase from Pantoea agglomerans CFBP13505 P0401

 Score = 68.6 bits (166), Expect = 3e-16
 Identities = 66/259 (25%), Positives = 112/259 (43%), Gaps = 28/259 (10%)

Query: 5   PVLALAKELISRQSVTPADAGCQ-------DLMIERLKALGFEIESMVFEDTTNFW---A 54
           P + L ++LI+  S++  DA          +L+    + LGF +E      T N +   A
Sbjct: 7   PFIELYRQLIATPSISATDAALDQSNETLINLLAGWFRDLGFSVEVQPVPGTRNKFNMLA 66

Query: 55  RRGTQSPLFVFAGHTDVVPAGPLSQWHTPPFEPTVIDGFLHGRGAADMKGSLACMIVAVE 114
           R G+ +   + AGHTD VP     +W   PF  T  D  L+G G ADMKG  A ++  + 
Sbjct: 67  RTGSGAGGLLLAGHTDTVPFDD-GRWTRDPFTLTEHDNKLYGLGTADMKGFFAFILDTLR 125

Query: 115 RFIAEHPDHQGSIGFLITSDEEGPFINGTVRVVETLMARNELIDMCIVGEPSSTLAVGDV 174
               +       +  L T+DEE   + G     E+   R    D  I+GEP+S   V   
Sbjct: 126 D--VDVSTLSKPLYILATADEE-TTMAGAKYFSESTQLRP---DCAIIGEPTSLKPV--- 176

Query: 175 VKNGRRGSITGDLKVKGTQGHVAYPHLANNPV---HKALPALAELAAT---QWDEGNAYF 228
                +G ++  ++++G  GH + P    N +   H+++  L +L  T   ++       
Sbjct: 177 --RAHKGHLSNVIRIEGKSGHSSDPARGVNAIELMHESITHLMQLRNTLQQRYHHDGFAI 234

Query: 229 PPTSFQIPNLQAGTGASNV 247
           P  +    ++  G  A+ +
Sbjct: 235 PYPTMNFGHIHGGDAANRI 253