Pairwise Alignments

Query, 377 a.a., succinyl-diaminopimelate desuccinylase from Vibrio cholerae E7946 ATCC 55056

Subject, 375 a.a., N-succinyl-L,L-diaminopimelate desuccinylase (EC 3.5.1.18) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  502 bits (1292), Expect = e-147
 Identities = 249/372 (66%), Positives = 290/372 (77%), Gaps = 1/372 (0%)

Query: 5   PVLALAKELISRQSVTPADAGCQDLMIERLKALGFEIESMVFEDTTNFWARRGTQSPLFV 64
           PV+ L ++LI R S++P DAGCQ LMIERL+ +GF IE M F DT NFWA RG    L  
Sbjct: 4   PVIELTQQLIRRPSLSPDDAGCQALMIERLRKIGFTIEHMDFGDTQNFWAWRGRGETL-A 62

Query: 65  FAGHTDVVPAGPLSQWHTPPFEPTVIDGFLHGRGAADMKGSLACMIVAVERFIAEHPDHQ 124
           FAGHTDVVPAG + +W  PPFEPT+ DG L GRGAADMKGSLA M+VA ERF+A+HP H+
Sbjct: 63  FAGHTDVVPAGDVDRWINPPFEPTIRDGMLFGRGAADMKGSLAAMVVAAERFVAQHPHHR 122

Query: 125 GSIGFLITSDEEGPFINGTVRVVETLMARNELIDMCIVGEPSSTLAVGDVVKNGRRGSIT 184
           G + FLITSDEE    NGTV+VVE LMARNE +D C+VGEPSST  VGDVVKNGRRGS+T
Sbjct: 123 GRLAFLITSDEEASAKNGTVKVVEALMARNERLDYCLVGEPSSTEIVGDVVKNGRRGSLT 182

Query: 185 GDLKVKGTQGHVAYPHLANNPVHKALPALAELAATQWDEGNAYFPPTSFQIPNLQAGTGA 244
            +L + G QGHVAYPHLA+NPVH+A P L EL A +WD GN +FP TS Q+ N+QAGTG+
Sbjct: 183 CNLTIHGVQGHVAYPHLADNPVHRAAPFLNELVAIEWDRGNDFFPATSMQVANIQAGTGS 242

Query: 245 SNVIPGEFDVQFNFRFSTELTDEEIKRRVHSVLDAHGLDYDVKWTLSGQPFLTDTGELLA 304
           +NVIPGE  VQFNFRFSTELTDE IK RVH++L+ H L Y V W LSGQPFLT  G+L+ 
Sbjct: 243 NNVIPGELFVQFNFRFSTELTDEMIKERVHALLEKHQLRYTVDWWLSGQPFLTARGKLVD 302

Query: 305 AVVAAVEEVNHQAPALLTTGGTSDGRFIAQMGAQVVELGPVNATIHKVNECVRIADLEKL 364
           AVV A+E  N   P LLTTGGTSDGRFIA+MGAQVVELGPVNATIHK+NECV  ADL+ L
Sbjct: 303 AVVNAIEHYNEIKPQLLTTGGTSDGRFIARMGAQVVELGPVNATIHKINECVNAADLQLL 362

Query: 365 TDMYQKTLNHLL 376
             MYQ+ +  L+
Sbjct: 363 ARMYQRIMEQLV 374