Pairwise Alignments

Query, 377 a.a., succinyl-diaminopimelate desuccinylase from Vibrio cholerae E7946 ATCC 55056

Subject, 375 a.a., succinyl-diaminopimelate desuccinylase (NCBI) from Escherichia coli BW25113

 Score =  494 bits (1273), Expect = e-144
 Identities = 246/372 (66%), Positives = 288/372 (77%), Gaps = 1/372 (0%)

Query: 5   PVLALAKELISRQSVTPADAGCQDLMIERLKALGFEIESMVFEDTTNFWARRGTQSPLFV 64
           PV+ L ++LI R S++P DAGCQ L+IERL+A+GF +E M F DT NFWA RG Q     
Sbjct: 4   PVIELTQQLIRRPSLSPDDAGCQALLIERLQAIGFTVERMDFADTQNFWAWRG-QGETLA 62

Query: 65  FAGHTDVVPAGPLSQWHTPPFEPTVIDGFLHGRGAADMKGSLACMIVAVERFIAEHPDHQ 124
           FAGHTDVVP G   +W  PPFEPT+ DG L GRGAADMKGSLA M+VA ERF+A+HP+H 
Sbjct: 63  FAGHTDVVPPGDADRWINPPFEPTIRDGMLFGRGAADMKGSLAAMVVAAERFVAQHPNHT 122

Query: 125 GSIGFLITSDEEGPFINGTVRVVETLMARNELIDMCIVGEPSSTLAVGDVVKNGRRGSIT 184
           G + FLITSDEE    NGTV+VVE LMARNE +D C+VGEPSS   VGDVVKNGRRGS+T
Sbjct: 123 GRLAFLITSDEEASAHNGTVKVVEALMARNERLDYCLVGEPSSIEVVGDVVKNGRRGSLT 182

Query: 185 GDLKVKGTQGHVAYPHLANNPVHKALPALAELAATQWDEGNAYFPPTSFQIPNLQAGTGA 244
            +L + G QGHVAYPHLA+NPVH+A P L EL A +WD+GN +FP TS QI N+QAGTG+
Sbjct: 183 CNLTIHGVQGHVAYPHLADNPVHRAAPFLNELVAIEWDQGNEFFPATSMQIANIQAGTGS 242

Query: 245 SNVIPGEFDVQFNFRFSTELTDEEIKRRVHSVLDAHGLDYDVKWTLSGQPFLTDTGELLA 304
           +NVIPGE  VQFNFRFSTELTDE IK +V ++L+ H L Y V W LSGQPFLT  G+L+ 
Sbjct: 243 NNVIPGELFVQFNFRFSTELTDEMIKAQVLALLEKHQLRYTVDWWLSGQPFLTARGKLVD 302

Query: 305 AVVAAVEEVNHQAPALLTTGGTSDGRFIAQMGAQVVELGPVNATIHKVNECVRIADLEKL 364
           AVV AVE  N   P LLTTGGTSDGRFIA+MGAQVVELGPVNATIHK+NECV  ADL+ L
Sbjct: 303 AVVNAVEHYNEIKPQLLTTGGTSDGRFIARMGAQVVELGPVNATIHKINECVNAADLQLL 362

Query: 365 TDMYQKTLNHLL 376
             MYQ+ +  L+
Sbjct: 363 ARMYQRIMEQLV 374