Pairwise Alignments

Query, 377 a.a., succinyl-diaminopimelate desuccinylase from Vibrio cholerae E7946 ATCC 55056

Subject, 375 a.a., succinyldiaminopimelate desuccinylase (EC 3.5.1.18) from Enterobacter asburiae PDN3

 Score =  499 bits (1286), Expect = e-146
 Identities = 245/372 (65%), Positives = 293/372 (78%), Gaps = 1/372 (0%)

Query: 5   PVLALAKELISRQSVTPADAGCQDLMIERLKALGFEIESMVFEDTTNFWARRGTQSPLFV 64
           PV+ L ++LI R S++P DAGCQ LMIERL+A+GF +E M F DT NFWA RG Q     
Sbjct: 4   PVIELTQQLIRRPSLSPDDAGCQALMIERLRAIGFTVERMDFGDTQNFWAWRG-QGETLA 62

Query: 65  FAGHTDVVPAGPLSQWHTPPFEPTVIDGFLHGRGAADMKGSLACMIVAVERFIAEHPDHQ 124
           FAGHTDVVPAG   +W  PPFEPT+ DG L GRGAADMKGSLA M+VA ERF+A+HP+H+
Sbjct: 63  FAGHTDVVPAGDADRWINPPFEPTIRDGMLFGRGAADMKGSLAAMVVAAERFVAQHPNHK 122

Query: 125 GSIGFLITSDEEGPFINGTVRVVETLMARNELIDMCIVGEPSSTLAVGDVVKNGRRGSIT 184
             + FLITSDEE    NGTV+VVE LMARNE +D C+VGEPSST  VGDVVKNGRRGS+T
Sbjct: 123 NRLAFLITSDEEASAHNGTVKVVEALMARNERLDYCLVGEPSSTEVVGDVVKNGRRGSLT 182

Query: 185 GDLKVKGTQGHVAYPHLANNPVHKALPALAELAATQWDEGNAYFPPTSFQIPNLQAGTGA 244
            +L + G QGHVAYPHLA+NPVH+A P L+EL   +WD+GN +FPPTS QI N++AGTG+
Sbjct: 183 CNLTIHGVQGHVAYPHLADNPVHRAAPMLSELVGIEWDKGNEFFPPTSMQIANVKAGTGS 242

Query: 245 SNVIPGEFDVQFNFRFSTELTDEEIKRRVHSVLDAHGLDYDVKWTLSGQPFLTDTGELLA 304
           +NVIPG++ VQFNFRFSTELTDE IK RV ++L+ + L Y V+W LSGQPFLT  G+L+ 
Sbjct: 243 NNVIPGDYFVQFNFRFSTELTDEMIKARVVALLEKYQLRYTVEWWLSGQPFLTQRGKLVD 302

Query: 305 AVVAAVEEVNHQAPALLTTGGTSDGRFIAQMGAQVVELGPVNATIHKVNECVRIADLEKL 364
           AVV A+E  N   P LLTTGGTSDGRFIA+MGAQVVELGPVNATIHK+NECV  ADL+ L
Sbjct: 303 AVVNAIEHYNEIKPQLLTTGGTSDGRFIARMGAQVVELGPVNATIHKINECVNAADLQLL 362

Query: 365 TDMYQKTLNHLL 376
             MYQ+ +  L+
Sbjct: 363 ARMYQRIMEQLV 374