Pairwise Alignments

Query, 377 a.a., succinyl-diaminopimelate desuccinylase from Vibrio cholerae E7946 ATCC 55056

Subject, 374 a.a., acetylornithine deacetylase from Agrobacterium fabrum C58

 Score = 86.7 bits (213), Expect = 1e-21
 Identities = 94/345 (27%), Positives = 148/345 (42%), Gaps = 41/345 (11%)

Query: 48  DTTNFWARRGTQSPL-FVFAGHTDVVPAGPLSQWHTPPFEPTVIDGFLHGRGAADMKGSL 106
           D  N +A  G      ++ +GH DVVPAG   +W + PF        L+GRG  DMKG L
Sbjct: 48  DRANLFASFGPADVAGYILSGHMDVVPAGE-PEWSSDPFMLRAKGERLYGRGTTDMKGFL 106

Query: 107 ACMIVAV---ERFIAEHPDHQGSIGFLITSDEEGPFINGTVRVVETLMARNELIDMC--- 160
           A ++ A     R   + P H        + DEE        R V  ++AR  L ++C   
Sbjct: 107 ATVLAAAPAFSRMALKRPVH-----IAFSYDEE-----AGCRGVPHMIAR--LPELCAPP 154

Query: 161 ---IVGEPSSTLAVGDVVKNGRRGSITGDLKVKGTQGHVAYPHLANNPVHKALPALAELA 217
              I+GEPS+  AV        +G     + ++G  GH + P    N +H     +AE  
Sbjct: 155 AGAIIGEPSNLRAV-----RAHKGKAAARITIRGRSGHSSRPDQGVNAIHLMTGIMAEAV 209

Query: 218 ATQWDEGNAYFPPTSFQIP--NLQAGT----GASNVIPGEFDVQFNFRFSTELTDEEIKR 271
           AT  +     F  T+F+ P  +LQ GT     A N+IP    ++   R    ++   + +
Sbjct: 210 ATAQELTQGPF-ETTFEPPYSSLQIGTVRGGQALNIIPDHCAIELEARAIAGVSPLALLQ 268

Query: 272 RVHSVLDAHGLD-YDVKWT-LSGQPFLTDTGELLAAVVAAVEEVNHQAPALLTTGGTSDG 329
            V   ++A   +  D++WT +S  P L+  G+  A +   +E++         + GT  G
Sbjct: 269 PVRDGVEALAAEGIDIEWTPMSDYPALSLAGD--APLAKLLEDLTGAPCIPAVSYGTEAG 326

Query: 330 RFIAQMGAQVVELGPVN-ATIHKVNECVRIADLEKLTDMYQKTLN 373
            F A  G   +  GP +    HK +E +   +L     M +   N
Sbjct: 327 LFQA-AGVDAIICGPGDIGRAHKPDEYITTGELSACQSMLETLAN 370