Pairwise Alignments

Query, 378 a.a., flagellin E from Vibrio cholerae E7946 ATCC 55056

Subject, 551 a.a., Flagellin FliC from Variovorax sp. SCN45

 Score =  156 bits (395), Expect = 1e-42
 Identities = 80/175 (45%), Positives = 116/175 (66%)

Query: 1   MAMTVNTNVSALVAQRHLNSASEMLNQSLERLSSGNRINSAKDDAAGLQISNRLETQMRG 60
           MA  +NTN  +L+ Q +LN +   LN ++ RLSSG RINSAKDDAAG  I+NR    ++G
Sbjct: 1   MAQVINTNSLSLLTQNNLNKSQAALNSAIGRLSSGMRINSAKDDAAGQAIANRFTANIKG 60

Query: 61  LGIAVRNANDGISIMQTAEGAMQETTQLLQRMRDLSLQSANGSNSAAERVALQEEMAALN 120
           L  A RNANDGISI QT EGA+ E    LQR+R+LS+Q+  G+NSA +  ++Q E+    
Sbjct: 61  LTQATRNANDGISIAQTTEGALTEVNNNLQRIRELSVQAGTGTNSATDLDSIQGEITQRL 120

Query: 121 DELNRIAETTSFAGRKLLNGQFMKASFQIGASSGEAVQLSLRNMRSDSLEMGGFS 175
           DE+NR++  T F G K+L+    K + Q+GA+ GE + + L+ + + +L + GF+
Sbjct: 121 DEINRVSNQTQFNGVKVLSANAGKLTVQVGANDGETIDIDLQEISAKTLGLDGFN 175



 Score = 87.0 bits (214), Expect = 1e-21
 Identities = 76/251 (30%), Positives = 118/251 (47%), Gaps = 24/251 (9%)

Query: 127 AETTSFAGRKLLNGQFMKASFQIGASSGEAVQLSLRNMRSDSLEMGGFSYVAAALADKQW 186
           A+T + A    LNG     +F  GA+SG       + +  D ++       A A A    
Sbjct: 325 ADTGTGASSIKLNGTTY--NFAAGANSGFTYT---KTVSKDDVK------TAVAGAASTV 373

Query: 187 QVTKGKQQLNISYVNAQGENENIQIQAKEGDDIEELATYINGKTDKVSASVNEKGQLQLY 246
            + +G     +++  A G++ +  +     D+ +E+    +  TD    +VN +      
Sbjct: 374 NLGQGIFASTVTFAAAGGQSSDTYM-----DNDKEMTKTASYTTDYAVNAVNGE------ 422

Query: 247 IAGKETSGTLSFSGSLANELQMNLLGYEAVDNLDISSAGGAQRAVSVIDTALKYVDGHRS 306
           +    T+GT  ++  +     +N  G    D    S        ++ +D AL  VD  R 
Sbjct: 423 VTVASTTGTGKYAAQVGATAYINSAGKLTTDTT--SKGTKTTDPLAALDAALAKVDTLRG 480

Query: 307 ELGAMQNRFQHAISNLDNVHENLAASNSRIKDADYAKETTQMIKQQILQQVSTSVLAQAK 366
            LGA+QNRF   I+NL     NL++S SRI+DADYA E + M + QILQQ  TSVL+QA 
Sbjct: 481 SLGAVQNRFDSVIANLGTTVTNLSSSRSRIEDADYAVEVSNMTRAQILQQAGTSVLSQAN 540

Query: 367 RQPKFVLFLLR 377
           +  + VL LLR
Sbjct: 541 QTTQGVLSLLR 551