Pairwise Alignments

Query, 378 a.a., flagellin E from Vibrio cholerae E7946 ATCC 55056

Subject, 379 a.a., flagellin A from Vibrio cholerae E7946 ATCC 55056

 Score =  432 bits (1111), Expect = e-126
 Identities = 229/381 (60%), Positives = 281/381 (73%), Gaps = 6/381 (1%)

Query: 1   MAMTVNTNVSALVAQRHLNSASEMLNQSLERLSSGNRINSAKDDAAGLQISNRLETQMRG 60
           M + VNTNVSA+ AQR+L  A+  LN S+ERLSSGNRINSAKDDAAGLQISNRL  Q RG
Sbjct: 1   MTINVNTNVSAMTAQRYLTKATGELNTSMERLSSGNRINSAKDDAAGLQISNRLTAQSRG 60

Query: 61  LGIAVRNANDGISIMQTAEGAMQETTQLLQRMRDLSLQSANGSNSAAERVALQEEMAALN 120
           L +A+RNANDGISI QTAEGAM E+T +LQRMRDL+LQSANG+NSA+ER AL EE  AL 
Sbjct: 61  LDVAMRNANDGISIAQTAEGAMNESTSILQRMRDLALQSANGTNSASERQALNEESVALQ 120

Query: 121 DELNRIAETTSFAGRKLLNGQFMKASFQIGASSGEAVQLSLRNMRSDSLEMGGFSYVAAA 180
           DELNRIAETTSF GRKLLNG F +ASFQIG+SSGEA+ + L ++R+D   MGG S++A  
Sbjct: 121 DELNRIAETTSFGGRKLLNGSFGEASFQIGSSSGEAIIMGLTSVRADDFRMGGQSFIAEQ 180

Query: 181 LADKQWQVTKGKQQLNISYVNAQGENENIQIQAKEGDDIEELATYINGKTDKVSASVNEK 240
              K+W V    + L   +    GE   + I AK+GDDIEELATYING+TD   ASV+++
Sbjct: 181 PKTKEWGVPPTARDLKFEFTKKDGEAVVLDIIAKDGDDIEELATYINGQTDLFKASVDQE 240

Query: 241 GQLQLYIAGKETSGTLSFSGSLANELQMNLLG----YEAVDNLDISSAGGAQRAVSVIDT 296
           G+LQ+++A     G  + SG LA EL +N  G       V ++DI+S GG+Q AV +ID 
Sbjct: 241 GKLQIFVAEPNIEGNFNISGGLATELGLN--GGPGVKTTVQDIDITSVGGSQNAVGIIDA 298

Query: 297 ALKYVDGHRSELGAMQNRFQHAISNLDNVHENLAASNSRIKDADYAKETTQMIKQQILQQ 356
           ALKYVD  R++LGA QNR  H+ISNL N+ EN+ AS SRIKD D+AKETTQ+ K QILQQ
Sbjct: 299 ALKYVDSQRADLGAKQNRLSHSISNLSNIQENVEASKSRIKDTDFAKETTQLTKSQILQQ 358

Query: 357 VSTSVLAQAKRQPKFVLFLLR 377
             TS+LAQAK+ P   + LL+
Sbjct: 359 AGTSILAQAKQLPNSAISLLQ 379